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Tumor-specific transcripts

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TE_ID TE_family TE_superfamily TE_class Gene Class Coding Tumor-specific score Count
TE_19339 MIRb L2-end SINE TRAPPC9 Chimeric Non-coding 176.95 156
TE_16277 L1HS_5end L1 LINE COPG2 Chimeric Other 176.95 156
TE_8093 LTR7Y ERV1 LTR - Intergenic Non-coding 176.95 156
TE_14976 MLT2B3 ERV3 LTR - Intergenic Non-coding 176.58 469
TE_15987 L1HS_5end L1 LINE -, SEMA3D Chimeric, Intergenic Non-coding, Other 176.39 1251
TE_15271 L1PB1_3end L1 LINE -, ESR1 Chimeric, Intergenic Non-coding, Other 175.83 155
TE_1919 SVA_A SVA Retroposon PARK7, - Chimeric, Intergenic Non-coding, Other 174.70 154
TE_26119 L1HS_5end L1 LINE -, LINC02444 Chimeric, Intergenic Non-coding 174.42 618
TE_27403 L1HS_5end L1 LINE - Intergenic Non-coding 174.14 308
TE_20778 L1HS_5end L1 LINE MSANTD3-TMEFF1, TMEFF1 Chimeric Non-coding 174.02 771
TE_12393 L1HS_5end L1 LINE - Intergenic Non-coding 173.85 616
TE_27627 AluYk3 Alu SINE - Intergenic Non-coding 173.57 307
TE_10101 L1PREC2_orf2 L1 LINE - Intergenic Non-coding 173.57 153
TE_25122 L1HS_5end L1 LINE ENSG00000289174 Annoated Non-coding 171.94 1372
TE_38019 L1HS_5end L1 LINE - Intergenic Non-coding 171.32 607
TE_23401 L1HS_5end L1 LINE - Intergenic Non-coding 171.32 151
TE_18781 LTR5_Hs ERV2 LTR ENSG00000248347, - Chimeric, Intergenic Non-coding, Other 171.32 151
TE_11326 LTR86C ERV3 LTR - Intergenic Non-coding 171.32 151
TE_38017 AluY Alu SINE - Intergenic Non-coding 170.19 150
TE_27261 MER61A ERV1 LTR - Intergenic Non-coding, Other 170.19 150
TE_26782 MER52A ERV1 LTR - Intergenic Non-coding 169.06 149
TE_15206 L1HS_5end L1 LINE - Intergenic Non-coding 168.50 298
TE_3419 LTR7Y ERV1 LTR -, LINC02474 Chimeric, Intergenic Non-coding 167.94 148
TE_9708 SVA_F SVA Retroposon - Intergenic Non-coding 166.81 295
TE_22951 L1P1_5end L1 LINE - Intergenic Non-coding 166.01 1030
TE_38140 THE1A MaLR LTR TENM1, - Chimeric, Intergenic Non-coding, Other 164.56 145
TE_36605 LTR2B ERV1 LTR - Intergenic Non-coding 163.43 144
TE_22465 HERVH ERV1 LTR PIK3AP1 Chimeric Other 163.43 144
TE_18803 LTR12E ERV1 LTR - Intergenic Non-coding 163.43 144
TE_20777 L1HS_5end L1 LINE MSANTD3-TMEFF1, TMEFF1 Chimeric Non-coding 162.87 288
TE_18068 L1P1_orf2 L1 LINE ENSG00000253553 Chimeric Non-coding 162.30 287
TE_28734 MER1A Charlie DNA ENSG00000258598, - Chimeric, Intergenic Non-coding 162.30 143
TE_17122 L2 L2 LINE GNGT1, - Chimeric, Intergenic Non-coding 162.30 143
TE_16172 L1HS_5end L1 LINE IMMP2L Chimeric Non-coding 162.30 143
TE_6565 L1HS_5end L1 LINE - Intergenic Non-coding 162.30 143
TE_13369 SVA_D SVA Retroposon DTNBP1, - Chimeric, Intergenic Non-coding, Other 161.17 142
TE_19072 MER61B ERV1 LTR COX6C Chimeric Non-coding 160.61 284
TE_23419 L1P4e_5end L1 LINE - Intergenic Non-coding 160.05 141
TE_8327 SVA_B SVA Retroposon -, FHIT Chimeric, Intergenic Annoated, Non-coding 160.05 141
TE_7292 L1P1_5end L1 LINE GAP43, ENSG00000242880 Chimeric Non-coding 159.30 423
TE_26152 L1P1_5end L1 LINE - Intergenic Non-coding 158.92 281
TE_27639 AluY Alu SINE - Intergenic Non-coding 158.92 140
TE_32973 L1HS_5end L1 LINE ENSG00000286426 Chimeric Non-coding 158.54 421
TE_38536 L1P2_5end L1 LINE ENSG00000227486 Annoated Non-coding 157.79 699
TE_26752 LTR17 ERV1 LTR LINC02335 Chimeric Non-coding 157.79 699
TE_13888 L1P1_5end L1 LINE ENSG00000289178, - Chimeric, Intergenic Non-coding 157.23 557
TE_36172 MLT1J MaLR LTR SALL4, -, LINC01429 Chimeric, Intergenic Non-coding, Other 156.89 695
TE_18067 L1HS_5end L1 LINE ENSG00000253553 Chimeric Non-coding 156.67 416
TE_36606 LTR17 ERV1 LTR ENSG00000223870 Chimeric Non-coding 156.67 138
TE_27920 MER50 ERV1 LTR PSMC1, - Chimeric, Intergenic Non-coding, Other 156.67 138