TE_9708
Basic information Differential Expression Stage analysis Survival analysis Correlation analysis| TE family | SVA_F |
|---|---|
| TE superfamily | SVA |
| TE order | Retroposon |
| Gene | - |
| Class | Intergenic |
| Coding | Non-coding |
| Tumor-specific score | 166.81 |
| Counts of samples | TCGA_tumor:295; TCGA_normal:1; GTEx:0 |
| TSS | chr4(-):77983972 |
Transcript isoforms
| Transcript_ID | Gene | Class | Coding | ORF | Position |
|---|---|---|---|---|---|
| teRNA_9708.1 | - | Intergenic | Non-coding | Non-coding | chr4(-):77918457,77918477,77936451,77936546,77938033,77938128,77983906,77983973 |
| teRNA_9708.2 | - | Intergenic | Non-coding | Non-coding | chr4(-):77918457,77918477,77936451,77936546,77938033,77938128,77952424,77952563,77983906,77983973 |
1
GTEx
The proportion of samples in which the TE-initiated transcript was expressed across 46 body sites in the Genotype-Tissue Expression (GTEx) project.
TCGA
The proportion of samples in which the TE-initiated transcript was expressed across 33 cancer types from The Cancer Genome Atlas (TCGA).
GTEx
The expression of TE-initiated transcript across 46 body sites from The Genotype-Tissue Expression (GTEx) project.
