Tumor-specific transcripts
| TE_ID | TE_family | TE_superfamily | TE_class | Gene | Class | Coding | Tumor-specific score | Count |
|---|---|---|---|---|---|---|---|---|
| TE_38224 | L1HS_5end | L1 | LINE | - | Intergenic | Non-coding | 1231.92 | 1092 |
| TE_38282 | THE1B | MaLR | LTR | -, LINC02968 | Chimeric, Intergenic | Non-coding | 1036.93 | 919 |
| TE_11681 | L1HS_5end | L1 | LINE | - | Intergenic | Non-coding | 702.18 | 622 |
| TE_19169 | L1HS_5end | L1 | LINE | - | Intergenic | Non-coding | 669.49 | 593 |
| TE_32289 | AluY | Alu | SINE | LINC01992 | Annoated | Non-coding | 651.46 | 577 |
| TE_12740 | L1HS_5end | L1 | LINE | - | Intergenic | Non-coding | 565.80 | 501 |
| TE_20420 | MER61A | ERV1 | LTR | - | Intergenic | Non-coding | 543.82 | 964 |
| TE_14908 | L1PBa1_5end | L1 | LINE | - | Intergenic | Non-coding | 513.96 | 455 |
| TE_38164 | THE1A, L1HS_5end | MaLR, L1 | LINE, LTR | - | Intergenic | Non-coding | 499.87 | 886 |
| TE_14959 | L1HS_5end | L1 | LINE | - | Intergenic | Non-coding | 461.55 | 818 |
| TE_37988 | L1HS_5end | L1 | LINE | - | Intergenic | Non-coding | 457.60 | 405 |
| TE_18209 | L1HS_5end | L1 | LINE | - | Intergenic | Non-coding | 455.35 | 807 |
| TE_16041 | L1P1_5end | L1 | LINE | - | Intergenic | Non-coding | 428.30 | 379 |
| TE_27540 | L1HS_5end | L1 | LINE | ENSG00000257869 | Chimeric | Non-coding | 409.14 | 725 |
| TE_10676 | L1HS_5end | L1 | LINE | - | Intergenic | Non-coding | 402.37 | 356 |
| TE_15155 | L1HS_5end | L1 | LINE | EYA4, - | Chimeric, Intergenic | Non-coding, Other | 402.00 | 1069 |
| TE_9357 | L1HS_5end | L1 | LINE | LINC00504 | Chimeric | Non-coding | 391.10 | 346 |
| TE_4528 | L1HS_5end | L1 | LINE | KYNU | Chimeric | Non-coding | 385.47 | 341 |
| TE_38057 | L1HS_5end | L1 | LINE | - | Intergenic | Non-coding, Other | 374.20 | 331 |
| TE_27464 | L1HS_5end | L1 | LINE | -, ENSG00000215398, ENSG00000290354 | Chimeric, Intergenic | Non-coding | 366.31 | 324 |
| TE_6076 | L1HS_5end | L1 | LINE | - | Intergenic | Non-coding | 366.31 | 324 |
| TE_23587 | L1P2_5end | L1 | LINE | PATE2, ACRV1, - | Chimeric, Intergenic | Non-coding | 365.18 | 323 |
| TE_12623 | L1HS_5end | L1 | LINE | MCCC2 | Chimeric | Non-coding, Other | 364.05 | 322 |
| TE_10363 | L1HS_5end | L1 | LINE | - | Intergenic | Non-coding | 362.92 | 321 |
| TE_38409 | L1PBa1_5end | L1 | LINE | ENSG00000233928 | Annoated | Non-coding | 361.80 | 641 |
| TE_33411 | L1HS_5end | L1 | LINE | LINC01901 | Annoated | Non-coding | 351.65 | 935 |
| TE_38414 | L1HS_5end | L1 | LINE | CFAP47 | Chimeric | Other | 347.15 | 307 |
| TE_17866 | L1HS_5end | L1 | LINE | -, ENSG00000286878 | Chimeric, Intergenic | Non-coding, Other | 347.15 | 307 |
| TE_5575 | L1HS_5end | L1 | LINE | - | Intergenic | Non-coding | 344.89 | 305 |
| TE_10654 | L1HS_5end | L1 | LINE | ADGRL3 | Chimeric | Non-coding, Other | 340.95 | 604 |
| TE_20350 | L1HS_5end | L1 | LINE | CNTLN | Chimeric | Non-coding, Other | 334.75 | 593 |
| TE_15579 | L1HS_5end | L1 | LINE | CRPPA | Chimeric | Non-coding | 330.24 | 878 |
| TE_1270 | L1HS_5end | L1 | LINE | - | Intergenic | Non-coding, Other | 317.84 | 281 |
| TE_35110 | AluSz | Alu | SINE | NLRP7 | Chimeric | Non-coding, Other | 315.59 | 279 |
| TE_30044 | SVA_F | SVA | Retroposon | - | Intergenic | Non-coding | 313.33 | 277 |
| TE_18064 | L1HS_5end | L1 | LINE | CNBD1 | Chimeric | Non-coding | 311.08 | 275 |
| TE_13744 | L1HS_5end | L1 | LINE | EYS | Chimeric | Other | 308.07 | 819 |
| TE_11819 | L1HS_5end | L1 | LINE | - | Intergenic | Non-coding | 307.70 | 272 |
| TE_9549 | AluY | Alu | SINE | -, OCIAD2 | Chimeric, Intergenic | Non-coding | 303.19 | 268 |
| TE_36592 | MLT2B3 | ERV3 | LTR | ENSG00000229289, - | Chimeric, Intergenic | Non-coding | 294.17 | 260 |
| TE_12106 | L1HS_5end | L1 | LINE | -, LINC01202 | Chimeric, Intergenic | Non-coding | 293.04 | 519 |
| TE_31246 | L1HS_5end | L1 | LINE | - | Intergenic | Non-coding | 288.54 | 255 |
| TE_11867 | L1HS_5end | L1 | LINE | ENSG00000287390, - | Chimeric, Intergenic | Non-coding | 285.16 | 1517 |
| TE_16621 | L1HS_5end | L1 | LINE | NXPH1, - | Chimeric, Intergenic | Non-coding | 282.90 | 250 |
| TE_24248 | L1HS_5end | L1 | LINE | ENSG00000250519 | Annoated | Non-coding | 280.65 | 248 |
| TE_12012 | L1HS_5end | L1 | LINE | -, FBXO38-DT | Chimeric, Intergenic | Non-coding | 279.52 | 247 |
| TE_14981 | AluJb, SVA_E | Alu, SVA | Retroposon, SINE | LIN28B | Annoated | Non-coding | 277.27 | 245 |
| TE_15374 | L1HS_5end | L1 | LINE | - | Intergenic | Non-coding | 276.14 | 244 |
| TE_13678 | L1HS_5end | L1 | LINE | PKHD1 | Chimeric | Other | 275.57 | 488 |
| TE_30479 | L1HS_5end | L1 | LINE | ENSG00000261310 | Annoated | Non-coding | 274.45 | 486 |