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TE_27639

Basic information Differential Expression Stage analysis Survival analysis Correlation analysis

TE family AluY
TE superfamily Alu
TE class SINE
Gene -
Class Intergenic
Coding Non-coding
Tumor-specific score 158.92
Counts of samples TCGA_tumor:140; TCGA_normal:0; GTEx:0
TSS chr14(+):46844985


Transcript isoforms

Transcript_ID Gene Class Coding ORF Position
teRNA_27639.1 - Intergenic Non-coding Non-coding chr14(+):46844986,46845320,46894917,46894937
teRNA_27639.2 - Intergenic Non-coding Non-coding chr14(+):46844986,46845320,46871734,46871754
teRNA_27639.3 - Intergenic Non-coding Non-coding chr14(+):46844986,46845320,46845847,46845867
teRNA_27639.4 - Intergenic Non-coding Non-coding chr14(+):46844986,46845320,46845847,46845943,46884874,46884894
teRNA_27639.5 - Intergenic Non-coding Non-coding chr14(+):46844986,46845320,46884874,46884894
teRNA_27639.6 - Intergenic Non-coding Non-coding chr14(+):46844986,46845320,46884874,46886589,46893004,46893024
teRNA_27639.7 - Intergenic Non-coding Non-coding chr14(+):46844986,46845320,46902933,46902953
teRNA_27639.8 - Intergenic Non-coding Non-coding chr14(+):46844986,46845320,46902933,46903089,46910419,46910439
teRNA_27639.9 - Intergenic Non-coding Non-coding chr14(+):46844986,46845320,46893004,46893177,46894920,46895015,46902933,46903089,46910419,46910439
teRNA_27639.10 - Intergenic Non-coding Non-coding chr14(+):46844986,46845320,46893004,46893024

GTEx

The proportion of samples in which the TE-initiated transcript was expressed across 46 body sites in the Genotype-Tissue Expression (GTEx) project.



TCGA

The proportion of samples in which the TE-initiated transcript was expressed across 33 cancer types from The Cancer Genome Atlas (TCGA).



GTEx

The expression of TE-initiated transcript across 46 body sites from The Genotype-Tissue Expression (GTEx) project.



TCGA

The expression of TE-initiated transcript across 33 cancer types from The Cancer Genome Atlas (TCGA).