Tumor-specific transcripts
| TE_ID | TE_family | TE_superfamily | TE_class | Gene | Class | Coding | Tumor-specific score | Count |
|---|---|---|---|---|---|---|---|---|
| TE_16398 | L1HS_5end | L1 | LINE | - | Intergenic | Non-coding | 270.50 | 239 |
| TE_16188 | L1HS_5end | L1 | LINE | - | Intergenic | Non-coding, Other | 263.74 | 701 |
| TE_33087 | L1HS_5end | L1 | LINE | ENSG00000267284 | Chimeric | Non-coding | 263.74 | 467 |
| TE_37639 | HERVH | ERV1 | LTR | TLR8-AS1, - | Chimeric, Intergenic | Non-coding | 261.49 | 231 |
| TE_19749 | L1HS_5end | L1 | LINE | - | Intergenic | Non-coding | 261.49 | 231 |
| TE_5933 | L1HS_5end | L1 | LINE | - | Intergenic | Non-coding | 261.49 | 231 |
| TE_13399 | L1HS_5end | L1 | LINE | LNC-LBCS | Chimeric | Non-coding | 259.23 | 229 |
| TE_24833 | L1HS_5end | L1 | LINE | NELL2, - | Chimeric, Intergenic | Non-coding, Other | 257.73 | 685 |
| TE_26775 | LTR17 | ERV1 | LTR | - | Intergenic | Non-coding | 254.44 | 902 |
| TE_19254 | L1HS_5end | L1 | LINE | -, CASC8 | Chimeric, Intergenic | Non-coding | 253.41 | 1348 |
| TE_25083 | L1HS_5end | L1 | LINE | ENSG00000257191 | Chimeric | Non-coding | 252.47 | 223 |
| TE_25748 | SVA_D | SVA | Retroposon | ATF7IP, - | Chimeric, Intergenic | Non-coding, Other | 251.34 | 222 |
| TE_26875 | L1HS_5end | L1 | LINE | - | Intergenic | Non-coding | 244.58 | 216 |
| TE_20684 | SVA_F | SVA | Retroposon | - | Intergenic | Non-coding | 244.58 | 216 |
| TE_8552 | L1HS_5end | L1 | LINE | LRRC58, ENSG00000282950 | Chimeric | Non-coding | 241.42 | 1070 |
| TE_2680 | L1HS_5end | L1 | LINE | - | Intergenic | Non-coding | 241.20 | 213 |
| TE_27488 | SVA_B | SVA | Retroposon | TRAV2, - | Chimeric, Intergenic | Non-coding | 240.07 | 212 |
| TE_11443 | L1HS_5end | L1 | LINE | TTC33, - | Chimeric, Intergenic | Non-coding | 238.94 | 211 |
| TE_8413 | L1HS_5end | L1 | LINE | - | Intergenic | Non-coding | 237.82 | 210 |
| TE_18721 | MER61A | ERV1 | LTR | ENSG00000253363 | Annoated | Non-coding | 237.37 | 1052 |
| TE_8832 | LTR12E | ERV1 | LTR | -, ENSG00000243620 | Chimeric, Intergenic | Non-coding | 236.69 | 209 |
| TE_23820 | HERV17 | ERV1 | LTR | ANO3 | Chimeric | Other | 235.56 | 208 |
| TE_27174 | MER52A | ERV1 | LTR | CPB2 | Chimeric | Non-coding | 234.44 | 207 |
| TE_26797 | L1HS_5end | L1 | LINE | - | Intergenic | Non-coding | 234.44 | 207 |
| TE_2376 | SVA_D | SVA | Retroposon | - | Intergenic | Non-coding | 234.44 | 207 |
| TE_18568 | L1HS_5end | L1 | LINE | MSR1, ENSG00000253496 | Chimeric | Non-coding | 230.21 | 816 |
| TE_13796 | AluY | Alu | SINE | - | Intergenic | Non-coding | 229.93 | 203 |
| TE_4961 | SVA_B | SVA | Retroposon | WNT6, - | Chimeric, Intergenic | Non-coding, Other | 229.93 | 203 |
| TE_10721 | L1HS_5end | L1 | LINE | ENSG00000250735 | Annoated | Non-coding | 228.42 | 607 |
| TE_2869 | L1HS_5end | L1 | LINE | EMBP1 | Chimeric | Non-coding, Other | 227.67 | 807 |
| TE_7581 | L1HS_5end | L1 | LINE | - | Intergenic | Non-coding | 227.67 | 201 |
| TE_1332 | L1HS_5end | L1 | LINE | - | Intergenic | Non-coding | 225.42 | 199 |
| TE_8897 | L1P1_5end | L1 | LINE | PLCH1 | Chimeric | Other | 224.29 | 198 |
| TE_25747 | SVA_D | SVA | Retroposon | ATF7IP, - | Chimeric, Intergenic | Non-coding, Other | 223.16 | 197 |
| TE_10822 | MER45C | Tip100 | DNA | LINC02267, - | Chimeric, Intergenic | Non-coding | 221.47 | 392 |
| TE_17890 | HAL1ME | L1 | LINE | - | Intergenic | Non-coding | 220.91 | 195 |
| TE_6821 | L1HS_5end | L1 | LINE | - | Intergenic | Non-coding, Other | 220.23 | 976 |
| TE_21193 | MER50 | ERV1 | LTR | - | Intergenic | Non-coding | 219.78 | 194 |
| TE_16816 | L1HS_5end | L1 | LINE | GPR141 | Chimeric | Non-coding | 219.78 | 194 |
| TE_34891 | LTR36 | ERV1 | LTR | -, CEACAM7 | Chimeric, Intergenic | Annoated, Non-coding, Chimeric_truncated | 217.53 | 192 |
| TE_22093 | L1HS_5end | L1 | LINE | - | Intergenic | Non-coding | 216.40 | 191 |
| TE_12375 | L1HS_5end | L1 | LINE | - | Intergenic | Non-coding | 216.12 | 766 |
| TE_14867 | LTR2B | ERV1 | LTR | ENSG00000223786, ENSG00000224583, - | Chimeric, Intergenic | Non-coding | 215.28 | 190 |
| TE_10722 | L1HS_5end | L1 | LINE | ENSG00000250735 | Chimeric | Non-coding | 215.28 | 190 |
| TE_6136 | L1HS_5end | L1 | LINE | CCDC148 | Chimeric | Non-coding, Other | 215.28 | 190 |
| TE_38735 | L1HS_5end | L1 | LINE | HTR2C | Chimeric | Non-coding | 214.52 | 570 |
| TE_38265 | LTR7C | ERV1 | LTR | PLCXD1 | Chimeric | Non-coding, Other | 213.02 | 188 |
| TE_7317 | L1M3_orf2, L1P3_orf2 | L1 | LINE | CD86 | Chimeric | Non-coding, Other | 213.02 | 188 |
| TE_12695 | AluSx1 | Alu | SINE | SPZ1, - | Chimeric, Intergenic | Non-coding | 211.89 | 187 |
| TE_22755 | AluY | Alu | SINE | ENSG00000284931, OR51B5, HBE1, ENSG00000239920, -, HBG2 | Chimeric, Intergenic | Non-coding | 210.77 | 186 |