TE_11443
Basic information Differential Expression Stage analysis Survival analysis Correlation analysis| TE family | L1HS_5end |
|---|---|
| TE superfamily | L1 |
| TE class | LINE |
| Gene | TTC33, - |
| Class | Chimeric, Intergenic |
| Coding | Non-coding |
| Tumor-specific score | 238.94 |
| Counts of samples | TCGA_tumor:211; TCGA_normal:0; GTEx:0 |
| TSS | chr5(-):40541692 |
Transcript isoforms
| Transcript_ID | Gene | Class | Coding | ORF | Position |
|---|---|---|---|---|---|
| teRNA_11443.1 | TTC33 | Chimeric | Non-coding | Non-coding | chr5(-):40513049,40513069,40541239,40541693 |
| teRNA_11443.2 | TTC33 | Chimeric | Non-coding | Non-coding | chr5(-):40513049,40513069,40539626,40539724,40541239,40541693 |
| teRNA_11443.3 | - | Intergenic | Non-coding | Non-coding | chr5(-):40539704,40539724,40541239,40541693 |
| teRNA_11443.4 | - | Intergenic | Non-coding | Non-coding | chr5(-):40531146,40531166,40541239,40541693 |
| teRNA_11443.5 | TTC33 | Chimeric | Non-coding | Non-coding | chr5(-):40513049,40513069,40531068,40531166,40541239,40541693 |
1
GTEx
The proportion of samples in which the TE-initiated transcript was expressed across 46 body sites in the Genotype-Tissue Expression (GTEx) project.
TCGA
The proportion of samples in which the TE-initiated transcript was expressed across 33 cancer types from The Cancer Genome Atlas (TCGA).
GTEx
The expression of TE-initiated transcript across 46 body sites from The Genotype-Tissue Expression (GTEx) project.
