TE_38265
Basic information Differential Expression Stage analysis Survival analysis Correlation analysis| TE family | LTR7C |
|---|---|
| TE superfamily | ERV1 |
| TE class | LTR |
| Gene | PLCXD1 |
| Class | Chimeric |
| Coding | Non-coding, Other |
| Tumor-specific score | 213.02 |
| Counts of samples | TCGA_tumor:188; TCGA_normal:0; GTEx:0 |
| TSS | chrX(+):279097 |
Transcript isoforms
| Transcript_ID | Gene | Class | Coding | ORF | Position |
|---|---|---|---|---|---|
| teRNA_38265.1 | PLCXD1 | Chimeric | Non-coding | Non-coding | chrX(+):279098,279185,284167,284314,288733,288869,290648,290776,291499,291654,293035,293218,299097,299117 |
| teRNA_38265.2 | PLCXD1 | Chimeric | Other | MGGQVSASNSFSRLHCRNANEDWMSALCPRLWDVPLHHLSIPGSHDTMTYCLNKKSPISHEESRLLQLLNKALPCITRPVVLKWSVTQALDVTEQLDAGVRYLDLRIAHMLEGSEKNLHFVHMVYTTALVEVRPG* | chrX(+):279098,279185,284167,284314,288733,288869,290648,290792,291499,291519 |
| teRNA_38265.3 | PLCXD1 | Chimeric | Non-coding | Non-coding | chrX(+):279098,279185,284167,284314,288733,288869,290648,290776,291499,291519 |
| teRNA_38265.4 | PLCXD1 | Chimeric | Non-coding | Non-coding | chrX(+):279098,279185,284167,284314,288733,288753 |
| teRNA_38265.5 | PLCXD1 | Chimeric | Non-coding | Non-coding | chrX(+):279098,279185,281482,281684,284167,284314,288733,288869,290648,290776,291499,291654,293035,293218,299097,299117 |
| teRNA_38265.6 | PLCXD1 | Chimeric | Non-coding | Non-coding | chrX(+):279098,279185,281482,281684,284167,284314,288733,288753 |
| teRNA_38265.7 | PLCXD1 | Chimeric | Non-coding | Non-coding | chrX(+):279098,279185,279293,279439,281482,281684,284167,284314,288733,288869,290648,290776,291499,291654,293035,293218,299097,299117 |
| teRNA_38265.8 | PLCXD1 | Chimeric | Non-coding | Non-coding | chrX(+):279098,279185,279293,279439,281482,281684,284167,284314,288733,288753 |
| teRNA_38265.9 | PLCXD1 | Chimeric | Non-coding | Non-coding | chrX(+):279098,279185,281610,281684,284167,284314,288733,288869,290648,290776,291499,291654,293035,293218,299097,299117 |
| teRNA_38265.10 | PLCXD1 | Chimeric | Non-coding | Non-coding | chrX(+):279098,279185,281610,281684,284167,284314,288733,288753 |
1
GTEx
The proportion of samples in which the TE-initiated transcript was expressed across 46 body sites in the Genotype-Tissue Expression (GTEx) project.
TCGA
The proportion of samples in which the TE-initiated transcript was expressed across 33 cancer types from The Cancer Genome Atlas (TCGA).
GTEx
The expression of TE-initiated transcript across 46 body sites from The Genotype-Tissue Expression (GTEx) project.
