TE_23820
Basic information Differential Expression Stage analysis Survival analysis Correlation analysis| TE family | HERV17 |
|---|---|
| TE superfamily | ERV1 |
| TE class | LTR |
| Gene | ANO3 |
| Class | Chimeric |
| Coding | Other |
| Tumor-specific score | 235.56 |
| Counts of samples | TCGA_tumor:208; TCGA_normal:0; GTEx:0 |
| TSS | chr11(+):26597106 |
Transcript isoforms
| Transcript_ID | Gene | Class | Coding | ORF | Position |
|---|---|---|---|---|---|
| teRNA_23820.1 | ANO3 | Chimeric | Other | MEIVNPITGKPEPHQPSSDKVTRLLVSVSGIFFMISLVITAVFGVVVYRLVVMEQFASFKWNFIKQYWQFATSAAAVCINFIIIMLLNLAYEKIAYLLTNLEYPRTESEWENSFALKMFLFQFVNLNSSIFYIAFFLGRFVGHPGKYNKLFDRWRLEECHPSGCLIDLCLQMGVIMFLKQIWNNFMELGYPLIQNWWSRHKIKRGIHDASIPQWENDWNLQPMNLHGLMDEYLEMVLQFGFTTIFVAAFPLAPLLALLNNIIEIRLDAYKFVTQWRRPLPARATDIGIWLGILEGIGILAVITNAFVIAITSDYIPRFVYEYKYGPCANHVEPSENCLKGYVNNSLSFFDLSELGMGKSGYCRYRDYRGPPWSSKPYEFTLQYWHILAARLAFIIVFEHLVFGIK | chr11(+):26597107,26597704,26598365,26598447,26598858,26598998,26599550,26599714,26624462,26624498,26634204,26634315,26635013,26635070,26639144,26639241,26641896,26642029,26643182,26643334,26647709,26647856,26656125,26656205,26656376,26656481,26660262,26660282 |
1
GTEx
The proportion of samples in which the TE-initiated transcript was expressed across 46 body sites in the Genotype-Tissue Expression (GTEx) project.
TCGA
The proportion of samples in which the TE-initiated transcript was expressed across 33 cancer types from The Cancer Genome Atlas (TCGA).
GTEx
The expression of TE-initiated transcript across 46 body sites from The Genotype-Tissue Expression (GTEx) project.
