TE_27174
Basic information Differential Expression Stage analysis Survival analysis Correlation analysis| TE family | MER52A |
|---|---|
| TE superfamily | ERV1 |
| TE class | LTR |
| Gene | CPB2 |
| Class | Chimeric |
| Coding | Non-coding |
| Tumor-specific score | 234.44 |
| Counts of samples | TCGA_tumor:207; TCGA_normal:0; GTEx:0 |
| TSS | chr13(-):46086519 |
Transcript isoforms
| Transcript_ID | Gene | Class | Coding | ORF | Position |
|---|---|---|---|---|---|
| teRNA_27174.1 | CPB2 | Chimeric | Non-coding | Non-coding | chr13(-):46053778,46053798,46055762,46055849,46058179,46058381,46064648,46064741,46067307,46067417,46073873,46073977,46078800,46078901,46082441,46082549,46084219,46084343,46085258,46086520 |
| teRNA_27174.2 | CPB2 | Chimeric | Non-coding | Non-coding | chr13(-):46053778,46053798,46055762,46055849,46058179,46058381,46064648,46064741,46073873,46073977,46078800,46078901,46082441,46082549,46084219,46084343,46085258,46086520 |
| teRNA_27174.3 | CPB2 | Chimeric | Non-coding | Non-coding | chr13(-):46053778,46053798,46055762,46055849,46058179,46058381,46073873,46073977,46078800,46078901,46082441,46082549,46084219,46084343,46085258,46086520 |
| teRNA_27174.4 | CPB2 | Chimeric | Non-coding | Non-coding | chr13(-):46073482,46073502,46073873,46073977,46078800,46078901,46082441,46082549,46084219,46084343,46085258,46086520 |
| teRNA_27174.5 | CPB2 | Chimeric | Non-coding | Non-coding | chr13(-):46053778,46053798,46055762,46055849,46058179,46058381,46064648,46064741,46067307,46067417,46073873,46073977,46078800,46078901,46082441,46082549,46084219,46084328,46085258,46086520 |
| teRNA_27174.6 | CPB2 | Chimeric | Non-coding | Non-coding | chr13(-):46053778,46053798,46055762,46055849,46058179,46058381,46064648,46064741,46073873,46073977,46078800,46078901,46082441,46082549,46084219,46084328,46085258,46086520 |
| teRNA_27174.7 | CPB2 | Chimeric | Non-coding | Non-coding | chr13(-):46053778,46053798,46055762,46055849,46058179,46058381,46073873,46073977,46078800,46078901,46082441,46082549,46084219,46084328,46085258,46086520 |
| teRNA_27174.8 | CPB2 | Chimeric | Non-coding | Non-coding | chr13(-):46073482,46073502,46073873,46073977,46078800,46078901,46082441,46082549,46084219,46084328,46085258,46086520 |
1
GTEx
The proportion of samples in which the TE-initiated transcript was expressed across 46 body sites in the Genotype-Tissue Expression (GTEx) project.
TCGA
The proportion of samples in which the TE-initiated transcript was expressed across 33 cancer types from The Cancer Genome Atlas (TCGA).
GTEx
The expression of TE-initiated transcript across 46 body sites from The Genotype-Tissue Expression (GTEx) project.
