TE_33087
Basic information Differential Expression Stage analysis Survival analysis Correlation analysis| TE family | L1HS_5end |
|---|---|
| TE superfamily | L1 |
| TE class | LINE |
| Gene | ENSG00000267284 |
| Class | Chimeric |
| Coding | Non-coding |
| Tumor-specific score | 263.74 |
| Counts of samples | TCGA_tumor:467; TCGA_normal:0; GTEx:1 |
| TSS | chr18(+):55721140 |
Transcript isoforms
| Transcript_ID | Gene | Class | Coding | ORF | Position |
|---|---|---|---|---|---|
| teRNA_33087.1 | ENSG00000267284 | Chimeric | Non-coding | Non-coding | chr18(+):55721141,55721268,55721415,55721534,55759040,55759060 |
| teRNA_33087.2 | ENSG00000267284 | Chimeric | Non-coding | Non-coding | chr18(+):55721141,55721268,55721415,55721534,55784899,55784974,55786586,55786656,55788613,55788633 |
| teRNA_33087.3 | ENSG00000267284 | Chimeric | Non-coding | Non-coding | chr18(+):55721141,55721268,55721415,55721534,55761303,55761563,55762545,55762598,55772707,55772771,55784899,55784919 |
| teRNA_33087.4 | ENSG00000267284 | Chimeric | Non-coding | Non-coding | chr18(+):55721141,55721183,55721415,55721534,55784899,55784974,55786586,55786656,55788613,55788633 |
| teRNA_33087.5 | ENSG00000267284 | Chimeric | Non-coding | Non-coding | chr18(+):55721141,55721183,55721415,55721534,55761303,55761563,55762545,55762598,55772707,55772771,55784899,55784919 |
1
GTEx
The proportion of samples in which the TE-initiated transcript was expressed across 46 body sites in the Genotype-Tissue Expression (GTEx) project.
TCGA
The proportion of samples in which the TE-initiated transcript was expressed across 33 cancer types from The Cancer Genome Atlas (TCGA).
GTEx
The expression of TE-initiated transcript across 46 body sites from The Genotype-Tissue Expression (GTEx) project.
