TE_17890
Basic information Differential Expression Stage analysis Survival analysis Correlation analysis| TE family | HAL1ME |
|---|---|
| TE superfamily | L1 |
| TE order | LINE |
| Gene | - |
| Class | Intergenic |
| Coding | Non-coding |
| Tumor-specific score | 220.91 |
| Counts of samples | TCGA_tumor:195; TCGA_normal:0; GTEx:0 |
| TSS | chr8(+):54465952 |
Transcript isoforms
| Transcript_ID | Gene | Class | Coding | ORF | Position |
|---|---|---|---|---|---|
| teRNA_17890.1 | - | Intergenic | Non-coding | Non-coding | chr8(+):54465953,54466035,54466559,54466720,54469388,54469504,54469718,54469738 |
| teRNA_17890.2 | - | Intergenic | Non-coding | Non-coding | chr8(+):54465953,54466035,54466559,54469894,54470018,54470038 |
| teRNA_17890.3 | - | Intergenic | Non-coding | Non-coding | chr8(+):54465953,54466035,54466559,54466720,54467196,54467216 |
| teRNA_17890.4 | - | Intergenic | Non-coding | Non-coding | chr8(+):54465953,54466035,54466559,54466981,54467108,54467128 |
1
GTEx
The proportion of samples in which the TE-initiated transcript was expressed across 46 body sites in the Genotype-Tissue Expression (GTEx) project.
TCGA
The proportion of samples in which the TE-initiated transcript was expressed across 33 cancer types from The Cancer Genome Atlas (TCGA).
GTEx
The expression of TE-initiated transcript across 46 body sites from The Genotype-Tissue Expression (GTEx) project.
