Transcripts
| TE_ID | TE_family | TE_superfamily | TE_class | Gene | Class | Coding | Tumor-specific score | TSS |
|---|---|---|---|---|---|---|---|---|
| TE_51 | L1MD2_3end | L1 | LINE | NPHP4 | Chimeric | Non-coding, Other | 0.42 | chr1(-):5928105 |
| TE_52 | MLT1K | MaLR | LTR | NPHP4 | Chimeric | Other | 0.53 | chr1(-):5986988 |
| TE_53 | AluSz, SVA_E | Alu, SVA | Retroposon, SINE | RPL22 | Chimeric | Non-coding | 1.23 | chr1(-):6202693 |
| TE_54 | L2a_3end | L2 | LINE | RPL22 | Chimeric | Non-coding | 1.17 | chr1(-):6203318 |
| TE_55 | SVA_D | SVA | Retroposon | - | Intergenic | Non-coding | 0.17 | chr1(-):6234116 |
| TE_56 | L1MB8_3end | L1 | LINE | ACOT7 | Chimeric | Non-coding | 10.26 | chr1(-):6295302 |
| TE_57 | MIR1_Amn | L2-end | SINE | ACOT7 | Chimeric | Non-coding, Other | 6.17 | chr1(-):6300910 |
| TE_58 | SVA_E | SVA | Retroposon | ACOT7 | Chimeric | Non-coding | 1.38 | chr1(-):6305507 |
| TE_59 | SVA_D | SVA | Retroposon | ACOT7 | Chimeric | Non-coding | 1.89 | chr1(-):6306167 |
| TE_60 | MLT1J1 | MaLR | LTR | ACOT7 | Chimeric | Non-coding | 1.92 | chr1(-):6320686 |
| TE_61 | MIR1_Amn | L2-end | SINE | ACOT7 | Chimeric | Non-coding, Other | 1.19 | chr1(-):6350850 |
| TE_62 | MLT1B | MaLR | LTR | ACOT7 | Chimeric | Non-coding, Other | 1.42 | chr1(-):6356238 |
| TE_63 | L1MB7_3end | L1 | LINE | ACOT7 | Chimeric | Non-coding, Other | 7.46 | chr1(-):6361300 |
| TE_64 | LTR13 | ERV2 | LTR | ACOT7 | Chimeric | Non-coding, Other | 3.19 | chr1(-):6363632 |
| TE_65 | AluY | Alu | SINE | ACOT7 | Chimeric | Non-coding, Other | 0.85 | chr1(-):6377902 |
| TE_66 | L2b_3end | L2 | LINE | PLEKHG5 | Chimeric | Non-coding, Chimeric_truncated, Other | 1.28 | chr1(-):6472130 |
| TE_67 | L2a_3end | L2 | LINE | PLEKHG5 | Chimeric | Annoated, Non-coding, Chimeric_truncated, Other | 0.28 | chr1(-):6482252 |
| TE_68 | FRAM | Alu | SINE | NOL9 | Chimeric | Non-coding, Other | 1.08 | chr1(-):6536910 |
| TE_69 | L1MEg_5end | L1 | LINE | DNAJC11 | Chimeric | Non-coding, Other | 0.49 | chr1(-):6640809 |
| TE_70 | L2d_3end | L2 | LINE | CAMTA1-AS1 | Chimeric, Annoated | Non-coding | 0.53 | chr1(-):7441575 |
| TE_71 | FLAM_A | Alu | SINE | UTS2, - | Chimeric, Intergenic | Non-coding, Other | 3.08 | chr1(-):7878633 |
| TE_72 | LTR36 | ERV1 | LTR | -, UTS2 | Chimeric, Intergenic | Non-coding, Other | 2.86 | chr1(-):7913326 |
| TE_73 | L2a_3end | L2 | LINE | - | Intergenic | Non-coding | 0.70 | chr1(-):8143634 |
| TE_74 | AluJr4 | Alu | SINE | - | Intergenic | Non-coding | 1.50 | chr1(-):8260204 |
| TE_75 | L2b_3end | L2 | LINE | RERE | Annoated | Non-coding | 0.69 | chr1(-):8424813 |
| TE_76 | L2 | L2 | LINE | RERE | Chimeric | Non-coding, Other | 0.53 | chr1(-):8464482 |
| TE_77 | MER102b | Charlie | DNA | RERE | Chimeric | Non-coding, Other | 1.52 | chr1(-):8499432 |
| TE_78 | MLT1M | MaLR | LTR | RERE | Annoated | Other | 6.05 | chr1(-):8826170 |
| TE_79 | HERVFH21 | ERV1 | LTR | - | Intergenic | Non-coding | 0.64 | chr1(-):8926883 |
| TE_80 | L1MEd_5end | L1 | LINE | SLC2A5 | Chimeric | Non-coding, Other | 0.98 | chr1(-):9049291 |
| TE_81 | AluSx | Alu | SINE | SLC2A5 | Chimeric | Non-coding, Other | 0.60 | chr1(-):9049698 |
| TE_82 | MIRb | L2-end | SINE | SLC2A5 | Chimeric | Non-coding, Other | 0.69 | chr1(-):9068414 |
| TE_83 | MER4B | ERV1 | LTR | SLC2A5 | Chimeric | Non-coding | 0.80 | chr1(-):9085638 |
| TE_84 | HERVFH19 | ERV1 | LTR | SLC2A5 | Chimeric | Non-coding, Other | 0.21 | chr1(-):9093431 |
| TE_85 | HERVFH19 | ERV1 | LTR | SLC2A5 | Chimeric | Non-coding | 2.36 | chr1(-):9094185 |
| TE_86 | MER110A | ERV1 | LTR | SLC2A5 | Chimeric | Non-coding | 0.48 | chr1(-):9097151 |
| TE_87 | MER115 | Tip100 | DNA | GPR157 | Chimeric | Non-coding | 1.20 | chr1(-):9112366 |
| TE_88 | AluSq2 | Alu | SINE | - | Intergenic | Other | 3.38 | chr1(-):9184419 |
| TE_89 | L2b_3end | L2 | LINE | - | Intergenic | Non-coding | 4.89 | chr1(-):9318811 |
| TE_90 | L2b_3end | L2 | LINE | - | Intergenic | Non-coding | 1.81 | chr1(-):9381232 |
| TE_91 | MIRb | L2-end | SINE | - | Intergenic | Non-coding | 8.82 | chr1(-):9417539 |
| TE_92 | THE1A | MaLR | LTR | LINC02606, - | Chimeric, Intergenic | Non-coding, Other | 5.84 | chr1(-):9451217 |
| TE_93 | AluSx | Alu | SINE | ENSG00000235263 | Chimeric | Non-coding | 2.03 | chr1(-):9505023 |
| TE_94 | AluSc8 | Alu | SINE | - | Intergenic | Non-coding | 17.39 | chr1(-):9561217 |
| TE_95 | AluYk3 | Alu | SINE | - | Intergenic | Non-coding, Other | 12.40 | chr1(-):9642710 |
| TE_96 | L2b_3end | L2 | LINE | PIK3CD-AS1 | Annoated | Non-coding | 1.36 | chr1(-):9654383 |
| TE_97 | AluJb | Alu | SINE | CLSTN1 | Chimeric | Other | 0.82 | chr1(-):9788028 |
| TE_98 | AluYh9, AluSc5 | Alu | SINE | CLSTN1 | Chimeric | Non-coding | 2.25 | chr1(-):9830519 |
| TE_99 | SVA_E | SVA | Retroposon | LZIC | Chimeric | Non-coding | 0.43 | chr1(-):9937487 |
| TE_100 | AluSx, SVA_B | Alu, SVA | Retroposon, SINE | LZIC | Chimeric | Non-coding | 43.39 | chr1(-):9956711 |