TE_68
Basic information Differential Expression Stage analysis Survival analysis Correlation analysis| TE family | FRAM |
|---|---|
| TE superfamily | Alu |
| TE class | SINE |
| Gene | NOL9 |
| Class | Chimeric |
| Coding | Non-coding, Other |
| Tumor-specific score | 1.08 |
| Counts of samples | TCGA_tumor:386; TCGA_normal:23; GTEx:381 |
| TSS | chr1(-):6536910 |
Transcript isoforms
| Transcript_ID | Gene | Class | Coding | ORF | Position |
|---|---|---|---|---|---|
| teRNA_68.1 | NOL9 | Chimeric | Other | MVYYGKPSCKNNYENYIDIVKYVFSAYKRESPLIVNTMGWVSDQGLLLLIDLIRLLSPSHVVQFRSDHSKYMPDLTPQYVDDMDGLYTKSKTKMRNRRFRLAAFADALEFADEEKESPVEFTGHKLIGVYTDFAFRITPRNRESHNKILRDLSILSYLSQLQPPMPKPLSPLHSLTPYQVPFNAVALRITHSDVAPTHILYAVNASWVGLCKIQDDVRGYTNGPILLAQTPICDCLGFGICRGIDMEKRLYHILTPVPPEELRTVNCLLVGAIAIPHCVLKCQRGIEGTV | chr1(-):6525983,6526003,6526696,6526829,6528994,6529171,6531968,6532079,6532463,6532760,6533280,6533441,6536705,6536911 |
| teRNA_68.2 | NOL9 | Chimeric | Non-coding | Non-coding | chr1(-):6532059,6532079,6532463,6532760,6533280,6533441,6536705,6536911 |
1
GTEx
The proportion of samples in which the TE-initiated transcript was expressed across 46 body sites in the Genotype-Tissue Expression (GTEx) project.
TCGA
The proportion of samples in which the TE-initiated transcript was expressed across 33 cancer types from The Cancer Genome Atlas (TCGA).
GTEx
The expression of TE-initiated transcript across 46 body sites from The Genotype-Tissue Expression (GTEx) project.
