TE_98
Basic information Differential Expression Stage analysis Survival analysis Correlation analysis| TE family | AluYh9, AluSc5 |
|---|---|
| TE superfamily | Alu |
| TE class | SINE |
| Gene | CLSTN1 |
| Class | Chimeric |
| Coding | Non-coding |
| Tumor-specific score | 2.25 |
| Counts of samples | TCGA_tumor:9; TCGA_normal:1; GTEx:3 |
| TSS | chr1(-):9830519 |
Transcript isoforms
| Transcript_ID | Gene | Class | Coding | ORF | Position |
|---|---|---|---|---|---|
| teRNA_98.1 | CLSTN1 | Chimeric | Non-coding | Non-coding | chr1(-):9730685,9730705,9731206,9731390,9731761,9731896,9733401,9733546,9733972,9734314,9830428,9830520 |
1
GTEx
The proportion of samples in which the TE-initiated transcript was expressed across 46 body sites in the Genotype-Tissue Expression (GTEx) project.
TCGA
The proportion of samples in which the TE-initiated transcript was expressed across 33 cancer types from The Cancer Genome Atlas (TCGA).
GTEx
The expression of TE-initiated transcript across 46 body sites from The Genotype-Tissue Expression (GTEx) project.
