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Tumor-specific transcripts

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TE_ID TE_family TE_superfamily TE_class Gene Class Coding Tumor-specific score Count
TE_32996 L1HS_5end L1 LINE DTNA Annoated Non-coding 210.28 1305
TE_5285 L1HS_5end L1 LINE - Intergenic Non-coding 209.26 556
TE_25847 L1PA15_3end L1 LINE SMCO2 Chimeric Non-coding, Other 208.51 184
TE_16335 MER61A ERV1 LTR - Intergenic Non-coding 207.39 183
TE_27893 MSTA MaLR LTR - Intergenic Non-coding 205.70 364
TE_3340 L1HS_5end L1 LINE SYT14 Chimeric Non-coding, Other 205.70 364
TE_9874 L1HS_5end L1 LINE ENSG00000248242, - Chimeric, Intergenic Non-coding 204.76 544
TE_15542 L1HS_5end L1 LINE COL28A1, - Chimeric, Intergenic Non-coding, Other 204.19 1086
TE_38336 L1P2_5end L1 LINE - Intergenic Non-coding, Other 204.00 180
TE_38502 L1HS_5end L1 LINE CLCN5 Chimeric Non-coding, Other 203.63 541
TE_2748 L1HS_5end L1 LINE - Intergenic Non-coding 203.55 902
TE_10023 L1HS_5end L1 LINE CLGN Chimeric Non-coding, Other 201.75 178
TE_14070 LTR12C ERV1 LTR -, RNF217-AS1 Chimeric, Intergenic Non-coding 200.06 354
TE_25059 L1HS_5end L1 LINE ENSG00000258294 Chimeric Non-coding 199.87 531
TE_29333 MER41-int, MER4-int ERV1 LTR MFGE8, - Chimeric, Intergenic Annoated, Non-coding, Other 198.37 175
TE_866 L1HS_5end L1 LINE - Intergenic Non-coding 196.96 698
TE_23001 L1HS_5end L1 LINE - Intergenic Non-coding 196.11 173
TE_14894 L1HS_5end L1 LINE - Intergenic Non-coding 195.83 694
TE_13845 L1HS_5end L1 LINE LINC01611, - Chimeric, Intergenic Non-coding 194.99 691
TE_16813 SVA_D SVA Retroposon - Intergenic Non-coding 193.86 171
TE_17937 L1HS_5end L1 LINE ENSG00000287844, -, ENSG00000253583 Chimeric, Intergenic Non-coding 192.73 170
TE_11699 L1HS_5end L1 LINE LINC01339, - Chimeric, Intergenic Non-coding 192.17 340
TE_7295 L1HS_5end L1 LINE LSAMP-AS1, - Chimeric, Intergenic Non-coding 191.61 169
TE_26883 L1HS_5end L1 LINE - Intergenic Non-coding 190.48 168
TE_27739 L1HS_5end L1 LINE SLC38A6 Chimeric Non-coding 189.35 167
TE_10929 L1PBa1_5end L1 LINE - Intergenic Non-coding 189.35 167
TE_16731 SVA_D SVA Retroposon SNX10, - Chimeric, Intergenic Non-coding 188.98 502
TE_23371 L1HS_5end L1 LINE - Intergenic Non-coding 188.23 166
TE_11143 L1HS_5end L1 LINE - Intergenic Non-coding 188.23 166
TE_1435 L1ME2_3end L1 LINE ENSG00000285280 Chimeric Non-coding 188.23 166
TE_26931 AluYk3 Alu SINE - Intergenic Non-coding 187.10 331
TE_25890 L1HS_5end L1 LINE - Intergenic Non-coding 187.10 165
TE_3136 L1HS_5end L1 LINE COP1-DT Chimeric Non-coding 187.10 165
TE_8913 L1HS_5end L1 LINE - Intergenic Non-coding 184.84 163
TE_24826 L1HS_5end L1 LINE ADAMTS20, - Chimeric, Intergenic Non-coding, Other 183.72 488
TE_19780 L1HS_5end L1 LINE - Intergenic Non-coding 183.72 162
TE_11710 L1HS_5end L1 LINE -, ENSG00000251361 Chimeric, Intergenic Non-coding 183.15 649
TE_37916 L1HS_5end L1 LINE OPHN1 Chimeric Non-coding, Truncated, Chimeric_truncated, Other 182.97 486
TE_11958 AluSq4 Alu SINE - Intergenic Non-coding, Other 182.59 161
TE_13929 L1HS_5end L1 LINE ENSG00000287616, - Chimeric, Intergenic Non-coding 181.46 160
TE_11341 LTR12F ERV1 LTR ENSG00000248605, - Chimeric, Intergenic Non-coding 181.46 160
TE_6044 L1HS_5end L1 LINE -, CCNT2-AS1 Chimeric, Intergenic Non-coding 181.14 1124
TE_6822 L1HS_5end L1 LINE - Intergenic Non-coding 179.66 796
TE_38791 L1HS_5end L1 LINE - Intergenic Non-coding 179.63 1274
TE_5576 L1HS_5end L1 LINE - Intergenic Non-coding 178.08 473
TE_35224 SVA_E SVA Retroposon SMOX, - Chimeric, Intergenic Non-coding, Other 178.08 157
TE_19187 L1P1_5end L1 LINE - Intergenic Non-coding 177.86 788
TE_13825 L1HS_5end L1 LINE - Intergenic Non-coding 177.60 1102
TE_11709 L1HS_5end L1 LINE -, ENSG00000251361 Chimeric, Intergenic Non-coding 176.95 470
TE_33424 L1HS_5end L1 LINE - Intergenic Non-coding 176.95 156