TE_866
Basic information Differential Expression Stage analysis Survival analysis Correlation analysis| TE family | L1HS_5end |
|---|---|
| TE superfamily | L1 |
| TE class | LINE |
| Gene | - |
| Class | Intergenic |
| Coding | Non-coding |
| Tumor-specific score | 196.96 |
| Counts of samples | TCGA_tumor:698; TCGA_normal:2; GTEx:1 |
| TSS | chr1(-):96604773 |
Transcript isoforms
| Transcript_ID | Gene | Class | Coding | ORF | Position |
|---|---|---|---|---|---|
| teRNA_866.1 | - | Intergenic | Non-coding | Non-coding | chr1(-):96557657,96557677,96581739,96582027,96604647,96604774 |
| teRNA_866.2 | - | Intergenic | Non-coding | Non-coding | chr1(-):96579049,96579069,96580322,96582027,96604647,96604774 |
| teRNA_866.3 | - | Intergenic | Non-coding | Non-coding | chr1(-):96579049,96579069,96581739,96582027,96604647,96604774 |
| teRNA_866.4 | - | Intergenic | Non-coding | Non-coding | chr1(-):96582007,96582027,96584709,96584819,96604647,96604774 |
| teRNA_866.5 | - | Intergenic | Non-coding | Non-coding | chr1(-):96582007,96582027,96584385,96584819,96604647,96604774 |
| teRNA_866.6 | - | Intergenic | Non-coding | Non-coding | chr1(-):96579049,96579069,96584385,96584819,96604647,96604774 |
| teRNA_866.7 | - | Intergenic | Non-coding | Non-coding | chr1(-):96579049,96579069,96584709,96584819,96604647,96604774 |
| teRNA_866.8 | - | Intergenic | Non-coding | Non-coding | chr1(-):96579049,96579069,96581739,96582027,96584709,96584819,96604647,96604774 |
| teRNA_866.9 | - | Intergenic | Non-coding | Non-coding | chr1(-):96582007,96582027,96584590,96584819,96604647,96604774 |
| teRNA_866.10 | - | Intergenic | Non-coding | Non-coding | chr1(-):96579049,96579069,96584385,96584819,96604732,96604774 |
GTEx
The proportion of samples in which the TE-initiated transcript was expressed across 46 body sites in the Genotype-Tissue Expression (GTEx) project.
TCGA
The proportion of samples in which the TE-initiated transcript was expressed across 33 cancer types from The Cancer Genome Atlas (TCGA).
GTEx
The expression of TE-initiated transcript across 46 body sites from The Genotype-Tissue Expression (GTEx) project.
