TE_5576
Basic information Differential Expression Stage analysis Survival analysis Correlation analysis| TE family | L1HS_5end |
|---|---|
| TE superfamily | L1 |
| TE class | LINE |
| Gene | - |
| Class | Intergenic |
| Coding | Non-coding |
| Tumor-specific score | 178.08 |
| Counts of samples | TCGA_tumor:473; TCGA_normal:0; GTEx:2 |
| TSS | chr2(-):58387553 |
Transcript isoforms
| Transcript_ID | Gene | Class | Coding | ORF | Position |
|---|---|---|---|---|---|
| teRNA_5576.1 | - | Intergenic | Non-coding | Non-coding | chr2(-):58366360,58366380,58366497,58367434,58379301,58379360,58387470,58387554 |
| teRNA_5576.2 | - | Intergenic | Non-coding | Non-coding | chr2(-):58359264,58359284,58367279,58367434,58379301,58379360,58387470,58387554 |
1
GTEx
The proportion of samples in which the TE-initiated transcript was expressed across 46 body sites in the Genotype-Tissue Expression (GTEx) project.
TCGA
The proportion of samples in which the TE-initiated transcript was expressed across 33 cancer types from The Cancer Genome Atlas (TCGA).
GTEx
The expression of TE-initiated transcript across 46 body sites from The Genotype-Tissue Expression (GTEx) project.
