TE_9874
Basic information Differential Expression Stage analysis Survival analysis Correlation analysis| TE family | L1HS_5end |
|---|---|
| TE superfamily | L1 |
| TE class | LINE |
| Gene | ENSG00000248242, - |
| Class | Chimeric, Intergenic |
| Coding | Non-coding |
| Tumor-specific score | 204.76 |
| Counts of samples | TCGA_tumor:544; TCGA_normal:2; GTEx:0 |
| TSS | chr4(-):104787372 |
Transcript isoforms
| Transcript_ID | Gene | Class | Coding | ORF | Position |
|---|---|---|---|---|---|
| teRNA_9874.1 | ENSG00000248242 | Chimeric | Non-coding | Non-coding | chr4(-):104653901,104653921,104666897,104667016,104746640,104746680,104786944,104787373 |
| teRNA_9874.2 | - | Intergenic | Non-coding | Non-coding | chr4(-):104767265,104767285,104786944,104787373 |
| teRNA_9874.3 | - | Intergenic | Non-coding | Non-coding | chr4(-):104740790,104740810,104786944,104787373 |
| teRNA_9874.4 | ENSG00000248242 | Chimeric | Non-coding | Non-coding | chr4(-):104653901,104653921,104786944,104787373 |
| teRNA_9874.5 | - | Intergenic | Non-coding | Non-coding | chr4(-):104772292,104772312,104786944,104787373 |
1
GTEx
The proportion of samples in which the TE-initiated transcript was expressed across 46 body sites in the Genotype-Tissue Expression (GTEx) project.
TCGA
The proportion of samples in which the TE-initiated transcript was expressed across 33 cancer types from The Cancer Genome Atlas (TCGA).
GTEx
The expression of TE-initiated transcript across 46 body sites from The Genotype-Tissue Expression (GTEx) project.
