TE_16335
Basic information Differential Expression Stage analysis Survival analysis Correlation analysis| TE family | MER61A |
|---|---|
| TE superfamily | ERV1 |
| TE order | LTR |
| Gene | - |
| Class | Intergenic |
| Coding | Non-coding |
| Tumor-specific score | 207.39 |
| Counts of samples | TCGA_tumor:183; TCGA_normal:0; GTEx:0 |
| TSS | chr7(-):138320983 |
Transcript isoforms
| Transcript_ID | Gene | Class | Coding | ORF | Position |
|---|---|---|---|---|---|
| teRNA_16335.1 | - | Intergenic | Non-coding | Non-coding | chr7(-):138288804,138288824,138295017,138295243,138320961,138320984 |
| teRNA_16335.2 | - | Intergenic | Non-coding | Non-coding | chr7(-):138214953,138214973,138215595,138215722,138216564,138216727,138320961,138320984 |
| teRNA_16335.3 | - | Intergenic | Non-coding | Non-coding | chr7(-):138214953,138214973,138215595,138215722,138216564,138216794,138320961,138320984 |
| teRNA_16335.4 | - | Intergenic | Non-coding | Non-coding | chr7(-):138214953,138214973,138215595,138215722,138216564,138216780,138320961,138320984 |
1
GTEx
The proportion of samples in which the TE-initiated transcript was expressed across 46 body sites in the Genotype-Tissue Expression (GTEx) project.
TCGA
The proportion of samples in which the TE-initiated transcript was expressed across 33 cancer types from The Cancer Genome Atlas (TCGA).
GTEx
The expression of TE-initiated transcript across 46 body sites from The Genotype-Tissue Expression (GTEx) project.
