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Transcripts


TE_ID TE_family TE_superfamily TE_class Gene Class Coding Tumor-specific score TSS
TE_151 FAM Alu SINE FBXO42, - Chimeric, Intergenic Non-coding 16.42 chr1(-):16279372
TE_152 L2 L2 LINE FBXO42, - Chimeric, Intergenic Non-coding 0.76 chr1(-):16284466
TE_153 AluJb Alu SINE FBXO42 Chimeric Non-coding, Other 1.13 chr1(-):16325049
TE_154 MamSINE1 RTE-end SINE FBXO42 Chimeric Other 0.82 chr1(-):16327247
TE_155 MSTB2 MaLR LTR FBXO42, - Chimeric, Intergenic Non-coding, Other 1.03 chr1(-):16342703
TE_156 MIRc L2-end SINE FBXO42 Chimeric Other 0.93 chr1(-):16349521
TE_157 AluSq2 Alu SINE FBXO42 Chimeric Other 0.61 chr1(-):16349851
TE_158 AluSp Alu SINE CROCCP3 Annoated Other 0.52 chr1(-):16492311
TE_159 L2a_3end L2 LINE CROCCP3 Chimeric Non-coding, Other 0.31 chr1(-):16497656
TE_160 MIRb L2-end SINE CROCCP3 Chimeric Non-coding, Other 0.58 chr1(-):16498757
TE_161 AluSg Alu SINE NBPF1, - Chimeric, Intergenic Non-coding, Other 0.38 chr1(-):16584700
TE_162 MIRb L2-end SINE NBPF1 Chimeric Other 0.31 chr1(-):16590267
TE_163 AluSp Alu SINE ESPNP, ENSG00000293526 Chimeric Non-coding, Other 3.73 chr1(-):16717356
TE_164 LTR8A ERV1 LTR ENSG00000238142 Chimeric Non-coding 1.86 chr1(-):16894004
TE_165 L2b_3end, L2 L2 LINE MFAP2 Chimeric Non-coding 3.38 chr1(-):16977480
TE_166 LTR64 ERV1 LTR MFAP2 Chimeric Non-coding, Other 6.94 chr1(-):16981611
TE_167 AluSp Alu SINE ATP13A2 Chimeric Non-coding, Other 0.97 chr1(-):16999374
TE_168 L2 L2 LINE ATP13A2, ENSG00000288636, - Chimeric, Intergenic Non-coding, Other 5.52 chr1(-):17013255
TE_169 SVA_D, AluSc8 Alu, SVA Retroposon, SINE SDHB Chimeric Non-coding, Other 24.96 chr1(-):17029533
TE_170 L2c_3end L2 LINE SDHB Annoated Non-coding 4.27 chr1(-):17045247
TE_171 MSTC MaLR LTR - Intergenic Non-coding 1.99 chr1(-):17140154
TE_172 L2 L2 LINE - Intergenic Non-coding, Other 22.54 chr1(-):17377419
TE_173 AluJb Alu SINE RCC2 Chimeric Non-coding 1.19 chr1(-):17414640
TE_174 Tigger19a Tigger DNA - Intergenic Non-coding 1.23 chr1(-):17546237
TE_175 MIR L2-end SINE - Intergenic Non-coding 5.71 chr1(-):17550966
TE_176 MER39 ERV1 LTR - Intergenic Non-coding 2.62 chr1(-):18298317
TE_177 THE1A MaLR LTR - Intergenic Non-coding 4.43 chr1(-):18497710
TE_178 MIR L2-end SINE - Intergenic Non-coding 3.23 chr1(-):18509617
TE_179 LTR85b Gypsy LTR - Intergenic Non-coding 2.59 chr1(-):18534031
TE_180 MIRb L2-end SINE - Intergenic Non-coding 5.79 chr1(-):18607651
TE_181 L2d2_3end L2 LINE ALDH4A1 Chimeric Non-coding, Other, Truncated 0.43 chr1(-):18884771
TE_182 MIRc L2-end SINE ALDH4A1 Chimeric Non-coding, Other, Truncated 1.89 chr1(-):18890644
TE_183 L2d2_3end L2 LINE ALDH4A1 Chimeric Non-coding, Other 1.01 chr1(-):18900964
TE_184 AluSg4 Alu SINE - Intergenic Non-coding 1.02 chr1(-):18991417
TE_185 L2b_3end, L2 L2 LINE - Intergenic Non-coding 2.90 chr1(-):19033632
TE_186 L1MC4_3end L1 LINE -, IFFO2 Chimeric, Intergenic Non-coding, Other 0.74 chr1(-):19050940
TE_187 MIRb L2-end SINE UBR4 Chimeric Other 11.15 chr1(-):19087419
TE_188 L2 L2 LINE UBR4 Chimeric Other 3.89 chr1(-):19090467
TE_189 MIRb L2-end SINE UBR4 Annoated Non-coding 3.62 chr1(-):19100150
TE_190 AluSp Alu SINE UBR4 Chimeric Other 0.10 chr1(-):19103347
TE_191 L2 L2 LINE UBR4 Chimeric Non-coding, Other 0.99 chr1(-):19111374
TE_192 AluJb Alu SINE EMC1 Chimeric Non-coding, Other 0.94 chr1(-):19249721
TE_193 AluY Alu SINE AKR7L Chimeric Non-coding 0.78 chr1(-):19271362
TE_194 L2b_3end L2 LINE AKR7A2 Chimeric Non-coding, Other 0.69 chr1(-):19311131
TE_195 SVA_B SVA Retroposon UBR4 Chimeric Other 5.32 chr1(-):19335283
TE_196 L2 L2 LINE CAPZB Chimeric Non-coding, Other 3.83 chr1(-):19353613
TE_197 MIR L2-end SINE CAPZB Chimeric Non-coding, Other 3.87 chr1(-):19436034
TE_198 AluSg Alu SINE CAPZB Chimeric Non-coding, Other 1.63 chr1(-):19512499
TE_199 MIRb L2-end SINE TMCO4 Chimeric Non-coding 0.72 chr1(-):19710593
TE_200 MLT1J MaLR LTR TMCO4 Annoated Non-coding 3.88 chr1(-):19738362