TE_173
Basic information Differential Expression Stage analysis Survival analysis Correlation analysis| TE family | AluJb |
|---|---|
| TE superfamily | Alu |
| TE class | SINE |
| Gene | RCC2 |
| Class | Chimeric |
| Coding | Non-coding |
| Tumor-specific score | 1.19 |
| Counts of samples | TCGA_tumor:389; TCGA_normal:13; GTEx:354 |
| TSS | chr1(-):17414640 |
Transcript isoforms
| Transcript_ID | Gene | Class | Coding | ORF | Position |
|---|---|---|---|---|---|
| teRNA_173.1 | RCC2 | Chimeric | Non-coding | Non-coding | chr1(-):17409174,17409194,17409974,17410051,17412122,17412194,17413073,17413178,17413537,17413717,17414615,17414641 |
1
GTEx
The proportion of samples in which the TE-initiated transcript was expressed across 46 body sites in the Genotype-Tissue Expression (GTEx) project.
TCGA
The proportion of samples in which the TE-initiated transcript was expressed across 33 cancer types from The Cancer Genome Atlas (TCGA).
GTEx
The expression of TE-initiated transcript across 46 body sites from The Genotype-Tissue Expression (GTEx) project.
