TE_199
Basic information Differential Expression Stage analysis Survival analysis Correlation analysis| TE family | MIRb |
|---|---|
| TE superfamily | L2-end |
| TE class | SINE |
| Gene | TMCO4 |
| Class | Chimeric |
| Coding | Non-coding |
| Tumor-specific score | 0.72 |
| Counts of samples | TCGA_tumor:332; TCGA_normal:24; GTEx:499 |
| TSS | chr1(-):19710593 |
Transcript isoforms
| Transcript_ID | Gene | Class | Coding | ORF | Position |
|---|---|---|---|---|---|
| teRNA_199.1 | TMCO4 | Chimeric | Non-coding | Non-coding | chr1(-):19682694,19682714,19683288,19683444,19694434,19694551,19700768,19700885,19710396,19710594 |
| teRNA_199.2 | TMCO4 | Chimeric | Non-coding | Non-coding | chr1(-):19683424,19683444,19694434,19694551,19700768,19700885,19710396,19710594 |
1
GTEx
The proportion of samples in which the TE-initiated transcript was expressed across 46 body sites in the Genotype-Tissue Expression (GTEx) project.
TCGA
The proportion of samples in which the TE-initiated transcript was expressed across 33 cancer types from The Cancer Genome Atlas (TCGA).
GTEx
The expression of TE-initiated transcript across 46 body sites from The Genotype-Tissue Expression (GTEx) project.
