TE_184
Basic information Differential Expression Stage analysis Survival analysis Correlation analysis| TE family | AluSg4 |
|---|---|
| TE superfamily | Alu |
| TE class | SINE |
| Gene | - |
| Class | Intergenic |
| Coding | Non-coding |
| Tumor-specific score | 1.02 |
| Counts of samples | TCGA_tumor:141; TCGA_normal:7; GTEx:149 |
| TSS | chr1(-):18991417 |
Transcript isoforms
| Transcript_ID | Gene | Class | Coding | ORF | Position |
|---|---|---|---|---|---|
| teRNA_184.1 | - | Intergenic | Non-coding | Non-coding | chr1(-):18990251,18990271,18991156,18991418 |
| teRNA_184.2 | - | Intergenic | Non-coding | Non-coding | chr1(-):18971269,18971289,18974649,18974740,18991156,18991418 |
1
GTEx
The proportion of samples in which the TE-initiated transcript was expressed across 46 body sites in the Genotype-Tissue Expression (GTEx) project.
TCGA
The proportion of samples in which the TE-initiated transcript was expressed across 33 cancer types from The Cancer Genome Atlas (TCGA).
GTEx
The expression of TE-initiated transcript across 46 body sites from The Genotype-Tissue Expression (GTEx) project.
