TE_158
Basic information Differential Expression Stage analysis Survival analysis Correlation analysis| TE family | AluSp |
|---|---|
| TE superfamily | Alu |
| TE class | SINE |
| Gene | CROCCP3 |
| Class | Annoated |
| Coding | Other |
| Tumor-specific score | 0.52 |
| Counts of samples | TCGA_tumor:996; TCGA_normal:90; GTEx:2051 |
| TSS | chr1(-):16492311 |
Transcript isoforms
| Transcript_ID | Gene | Class | Coding | ORF | Position |
|---|---|---|---|---|---|
| teRNA_158.1 | CROCCP3 | Annoated | Other | MRGRYEASQDLLGTLRKQLSDSESERRALEEQLQRLRDKTDSTMQAHEDAQREVQRLRSAKELLRREKSNLAHSLQVAQQQAKELRQERKKLQAAQEELRRQRYWLGEEQEDAVQDGVRVRRELEHSHRQLEQLEGKRSVLAKELVEVREALSRATLQRDMLQAEKAEVAEALTKAEGRGGLPAGLPVQAERPQREPCSGQVGSEPPCHPGHSWRKKSAPCRAGSGRRSRRPQWHGKSRSGWRRCGWNRRWRGRAWRAPYERRSRPRRQWSSSSPRCIMSAAGCRSS* | chr1(-):16470107,16470127,16475825,16476062,16476399,16476504,16476930,16477074,16478255,16478437,16483287,16483486,16484233,16484464,16484823,16484906,16485569,16485665,16486426,16486661,16490618,16490783,16490865,16490926,16491010,16491084,16491186,16491316,16491981,16492312 |
1
GTEx
The proportion of samples in which the TE-initiated transcript was expressed across 46 body sites in the Genotype-Tissue Expression (GTEx) project.
TCGA
The proportion of samples in which the TE-initiated transcript was expressed across 33 cancer types from The Cancer Genome Atlas (TCGA).
GTEx
The expression of TE-initiated transcript across 46 body sites from The Genotype-Tissue Expression (GTEx) project.
