TE_164
Basic information Differential Expression Stage analysis Survival analysis Correlation analysis| TE family | LTR8A |
|---|---|
| TE superfamily | ERV1 |
| TE class | LTR |
| Gene | ENSG00000238142 |
| Class | Chimeric |
| Coding | Non-coding |
| Tumor-specific score | 1.86 |
| Counts of samples | TCGA_tumor:190; TCGA_normal:7; GTEx:108 |
| TSS | chr1(-):16894004 |
Transcript isoforms
| Transcript_ID | Gene | Class | Coding | ORF | Position |
|---|---|---|---|---|---|
| teRNA_164.1 | ENSG00000238142 | Chimeric | Non-coding | Non-coding | chr1(-):16888765,16888785,16889216,16889603,16893973,16894005 |
| teRNA_164.2 | ENSG00000238142 | Chimeric | Non-coding | Non-coding | chr1(-):16888762,16888782,16889216,16889603,16893973,16894005 |
| teRNA_164.3 | ENSG00000238142 | Chimeric | Non-coding | Non-coding | chr1(-):16888765,16888785,16888920,16889029,16889216,16889603,16893973,16894005 |
| teRNA_164.4 | ENSG00000238142 | Chimeric | Non-coding | Non-coding | chr1(-):16888765,16888785,16888920,16889603,16893973,16894005 |
| teRNA_164.5 | ENSG00000238142 | Chimeric | Non-coding | Non-coding | chr1(-):16888762,16888782,16888920,16889603,16893973,16894005 |
1
GTEx
The proportion of samples in which the TE-initiated transcript was expressed across 46 body sites in the Genotype-Tissue Expression (GTEx) project.
TCGA
The proportion of samples in which the TE-initiated transcript was expressed across 33 cancer types from The Cancer Genome Atlas (TCGA).
GTEx
The expression of TE-initiated transcript across 46 body sites from The Genotype-Tissue Expression (GTEx) project.
