TE_189
Basic information Differential Expression Stage analysis Survival analysis Correlation analysis| TE family | MIRb |
|---|---|
| TE superfamily | L2-end |
| TE class | SINE |
| Gene | UBR4 |
| Class | Annoated |
| Coding | Non-coding |
| Tumor-specific score | 3.62 |
| Counts of samples | TCGA_tumor:975; TCGA_normal:177; GTEx:126 |
| TSS | chr1(-):19100150 |
Transcript isoforms
| Transcript_ID | Gene | Class | Coding | ORF | Position |
|---|---|---|---|---|---|
| teRNA_189.1 | UBR4 | Annoated | Non-coding | Non-coding | chr1(-):19093466,19093486,19093949,19094139,19094906,19095025,19095545,19095652,19096523,19096650,19097193,19097280,19099597,19099677,19100078,19100151 |
1
GTEx
The proportion of samples in which the TE-initiated transcript was expressed across 46 body sites in the Genotype-Tissue Expression (GTEx) project.
TCGA
The proportion of samples in which the TE-initiated transcript was expressed across 33 cancer types from The Cancer Genome Atlas (TCGA).
GTEx
The expression of TE-initiated transcript across 46 body sites from The Genotype-Tissue Expression (GTEx) project.
