TE_15579
Basic information Differential Expression Stage analysis Survival analysis Correlation analysis| TE family | L1HS_5end |
|---|---|
| TE superfamily | L1 |
| TE class | LINE |
| Gene | CRPPA |
| Class | Chimeric |
| Coding | Non-coding |
| Tumor-specific score | 330.24 |
| Counts of samples | TCGA_tumor:878; TCGA_normal:2; GTEx:0 |
| TSS | chr7(-):16216814 |
Transcript isoforms
| Transcript_ID | Gene | Class | Coding | ORF | Position |
|---|---|---|---|---|---|
| teRNA_15579.1 | CRPPA | Chimeric | Non-coding | Non-coding | chr7(-):16091779,16091799,16216066,16216197,16216688,16216815 |
| teRNA_15579.2 | CRPPA | Chimeric | Non-coding | Non-coding | chr7(-):16091779,16091799,16216066,16216197,16216351,16216815 |
| teRNA_15579.3 | CRPPA | Chimeric | Non-coding | Non-coding | chr7(-):16216177,16216197,16216351,16216815 |
| teRNA_15579.4 | CRPPA | Chimeric | Non-coding | Non-coding | chr7(-):16091779,16091799,16216066,16216197,16216351,16216542,16216688,16216815 |
| teRNA_15579.5 | CRPPA | Chimeric | Non-coding | Non-coding | chr7(-):16216177,16216197,16216351,16216542,16216688,16216815 |
1
GTEx
The proportion of samples in which the TE-initiated transcript was expressed across 46 body sites in the Genotype-Tissue Expression (GTEx) project.
TCGA
The proportion of samples in which the TE-initiated transcript was expressed across 33 cancer types from The Cancer Genome Atlas (TCGA).
GTEx
The expression of TE-initiated transcript across 46 body sites from The Genotype-Tissue Expression (GTEx) project.
