TE_14959
Basic information Differential Expression Stage analysis Survival analysis Correlation analysis| TE family | L1HS_5end |
|---|---|
| TE superfamily | L1 |
| TE class | LINE |
| Gene | - |
| Class | Intergenic |
| Coding | Non-coding |
| Tumor-specific score | 461.55 |
| Counts of samples | TCGA_tumor:818; TCGA_normal:0; GTEx:1 |
| TSS | chr6(+):94203672 |
Transcript isoforms
| Transcript_ID | Gene | Class | Coding | ORF | Position |
|---|---|---|---|---|---|
| teRNA_14959.1 | - | Intergenic | Non-coding | Non-coding | chr6(+):94203673,94203800,94206152,94206304,94216171,94216191 |
| teRNA_14959.2 | - | Intergenic | Non-coding | Non-coding | chr6(+):94203673,94203800,94206152,94206304,94216263,94216283 |
| teRNA_14959.3 | - | Intergenic | Non-coding | Non-coding | chr6(+):94203673,94203800,94206152,94206304,94247731,94247751 |
| teRNA_14959.4 | - | Intergenic | Non-coding | Non-coding | chr6(+):94203673,94203800,94206152,94206304,94216907,94216927 |
| teRNA_14959.5 | - | Intergenic | Non-coding | Non-coding | chr6(+):94203673,94203800,94205302,94205478,94206152,94206172 |
| teRNA_14959.6 | - | Intergenic | Non-coding | Non-coding | chr6(+):94203673,94203800,94205302,94205478,94206152,94206304,94216171,94216191 |
| teRNA_14959.7 | - | Intergenic | Non-coding | Non-coding | chr6(+):94203673,94203800,94205302,94205528,94206152,94206172 |
| teRNA_14959.8 | - | Intergenic | Non-coding | Non-coding | chr6(+):94203673,94203800,94205302,94205399,94206152,94206172 |
| teRNA_14959.9 | - | Intergenic | Non-coding | Non-coding | chr6(+):94203673,94203800,94205302,94205528,94206152,94206304,94216171,94216191 |
| teRNA_14959.10 | - | Intergenic | Non-coding | Non-coding | chr6(+):94203673,94203800,94205302,94206304,94216171,94216191 |
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2
GTEx
The proportion of samples in which the TE-initiated transcript was expressed across 46 body sites in the Genotype-Tissue Expression (GTEx) project.
TCGA
The proportion of samples in which the TE-initiated transcript was expressed across 33 cancer types from The Cancer Genome Atlas (TCGA).
GTEx
The expression of TE-initiated transcript across 46 body sites from The Genotype-Tissue Expression (GTEx) project.
