TE_14981
Basic information Differential Expression Stage analysis Survival analysis Correlation analysis| TE family | AluJb, SVA_E |
|---|---|
| TE superfamily | Alu, SVA |
| TE class | Retroposon, SINE |
| Gene | LIN28B |
| Class | Annoated |
| Coding | Non-coding |
| Tumor-specific score | 277.27 |
| Counts of samples | TCGA_tumor:245; TCGA_normal:0; GTEx:0 |
| TSS | chr6(+):104937000 |
Transcript isoforms
| Transcript_ID | Gene | Class | Coding | ORF | Position |
|---|---|---|---|---|---|
| teRNA_14981.1 | LIN28B | Annoated | Non-coding | Non-coding | chr6(+):104937001,104937116,104950461,104950509,104958099,104958286,105026298,105026482,105078414,105078434 |
1
GTEx
The proportion of samples in which the TE-initiated transcript was expressed across 46 body sites in the Genotype-Tissue Expression (GTEx) project.
TCGA
The proportion of samples in which the TE-initiated transcript was expressed across 33 cancer types from The Cancer Genome Atlas (TCGA).
GTEx
The expression of TE-initiated transcript across 46 body sites from The Genotype-Tissue Expression (GTEx) project.
