TE_38057
Basic information Differential Expression Stage analysis Survival analysis Correlation analysis| TE family | L1HS_5end |
|---|---|
| TE superfamily | L1 |
| TE class | LINE |
| Gene | - |
| Class | Intergenic |
| Coding | Non-coding, Other |
| Tumor-specific score | 374.20 |
| Counts of samples | TCGA_tumor:331; TCGA_normal:0; GTEx:0 |
| TSS | chrX(-):106469671 |
Transcript isoforms
| Transcript_ID | Gene | Class | Coding | ORF | Position |
|---|---|---|---|---|---|
| teRNA_38057.1 | - | Intergenic | Non-coding | Non-coding | chrX(-):106465437,106465457,106466439,106466688,106469545,106469672 |
| teRNA_38057.2 | - | Intergenic | Other | MRPGSPSRTGFFQLVEEEEELGEEEELGEEEELGEEEEEEFEEEKEEEEFEEEEEGEEGEEEEEGEGEEEEEGEEEDYEGEEEVYEREEDYEGEEEDYEGVEEGCEEEEEDEDKEEDEEEAEDEDKEEKEKDNKEDAEIACGACSAEHRVWDTATEDKLEYLFQERLPISELFFSKEAAEYKYENSDEEAQEAGGKKEREEDENEELEEGLEKDLDSAEHSPFKKSSLEAEK* | chrX(-):106465437,106465457,106466439,106466688,106467914,106469119,106469630,106469672 |
| teRNA_38057.3 | - | Intergenic | Other | MRPGSPSRTGFFQLVEEEEELGEEEELGEEEELGEEEEEEFEEEKEEEEFEEEEEGEEGEEEEEGEGEEEEEGEEEDYEGEEEVYEREEDYEGEEEDYEGVEEGCEEEEEDEDKEEDEEEAEDEDKEEKEKDNKEDAEIACGACSAEHRVWDTATEDKLEYLFQERLPISELFFSKEAAEYKYENSDEEAQEAGGKKEREEDENEELEEGLEKDLDSAEHSPFKKSSLEAEK* | chrX(-):106465437,106465457,106466439,106466688,106467914,106469119,106469545,106469672 |
| teRNA_38057.4 | - | Intergenic | Non-coding | Non-coding | chrX(-):106465437,106465457,106466439,106466688,106468547,106469119,106469545,106469672 |
| teRNA_38057.5 | - | Intergenic | Non-coding | Non-coding | chrX(-):106465437,106465457,106466439,106466688,106469630,106469672 |
| teRNA_38057.6 | - | Intergenic | Non-coding | Non-coding | chrX(-):106465437,106465457,106466439,106466688,106468547,106468658,106469545,106469672 |
| teRNA_38057.7 | - | Intergenic | Other | MRPGSPSRTGFFQLVEEEEELGEEEELGEEEELGEEEEEEFEEEKEEEEFEEEEEGEEGEEEEEGEGEEEEEGEEEDYEGEEEVYEREEDYEGEEEDYEGVEEGCEEEEEDEDKEEDEEEAEDEDKEEKEKDNKEDAEIACGACSAEHRVWDTATEDKLEYLFQERLPISELFFSKEAAEYKYENSDEEAQEAGGKKEREEDENEELEEGLEKDLDSAEHSPFKKSSLEAEK* | chrX(-):106465437,106465457,106466439,106466688,106467914,106468658,106469545,106469672 |
| teRNA_38057.8 | - | Intergenic | Non-coding | Non-coding | chrX(-):106466668,106466688,106468547,106468661,106469545,106469672 |
| teRNA_38057.9 | - | Intergenic | Other | MRPGSPSRTGFFQLVEEEEELGEEEELGEEEELGEEEEEEFEEEKEEEEFEEEEEGEEGEEEEEGEGEEEEEGEEEDYEGEEEVYEREEDYEGEEEDYEGVEEGCEEEEEDEDKEEDEEEAEDEDKEEKEKDNKEDAEIACGACSAEHRVWDTATEDKLEYLFQERLPISELFFSKEAAEYKYENSDEEAQEAGGKKEREEDENEELEEGLEKDLDSAEHSPFKKSSLEAEK* | chrX(-):106465437,106465457,106466439,106466688,106467914,106468661,106469545,106469672 |
| teRNA_38057.10 | - | Intergenic | Non-coding | Non-coding | chrX(-):106465437,106465457,106466439,106466589,106469545,106469672 |
1
GTEx
The proportion of samples in which the TE-initiated transcript was expressed across 46 body sites in the Genotype-Tissue Expression (GTEx) project.
TCGA
The proportion of samples in which the TE-initiated transcript was expressed across 33 cancer types from The Cancer Genome Atlas (TCGA).
GTEx
The expression of TE-initiated transcript across 46 body sites from The Genotype-Tissue Expression (GTEx) project.
