Zaphod
Basic information Differential Expression Stage analysis Survival analysis Correlation analysisThe patients were classified into two groups based on the expression levels of TE families or the identification of TE-initiated transcripts. To assess the statistical difference in survival between the two groups, a log-rank test was performed. The hazard ratio (HR) and p-value were computed using the "survdiff" function from the "survival" package in R.
| Tumor | HR | P_value |
|---|---|---|
| TCGA-KIRC | 0.84 | 0.47 |
| TCGA-STAD | 0.88 | 0.55 |
| TCGA-OV | 0.89 | 0.56 |
| TCGA-KIRP | 1.38 | 0.66 |
| TCGA-CESC | 1.10 | 0.80 |
| TCGA-READ | 0.87 | 0.82 |
| TCGA-PAAD | 0.99 | 0.97 |
| TCGA-TGCT | NA | 1.00 |
| TCGA-THYM | NA | 1.00 |