Zaphod
Basic information Differential Expression Stage analysis Survival analysis Correlation analysisThe patients were classified into two groups based on the expression levels of TE families or the identification of TE-initiated transcripts. To assess the statistical difference in survival between the two groups, a log-rank test was performed. The hazard ratio (HR) and p-value were computed using the "survdiff" function from the "survival" package in R.
| Tumor | HR | P_value |
|---|---|---|
| TCGA-LGG | 0.51 | 0.00e+00 |
| TCGA-GBM | 1.44 | 0.04 |
| TCGA-CHOL | 0.24 | 0.07 |
| TCGA-LUSC | 0.71 | 0.14 |
| TCGA-LAML | 1.43 | 0.15 |
| TCGA-COAD | 0.64 | 0.16 |
| TCGA-BRCA | 1.37 | 0.24 |
| TCGA-MESO | 1.62 | 0.25 |
| TCGA-KICH | 2.84 | 0.28 |
| TCGA-ESCA | 0.78 | 0.38 |