Charlie4a
Basic information Differential Expression Stage analysis Survival analysis Correlation analysisThe patients were classified into two groups based on the expression levels of TE families or the identification of TE-initiated transcripts. To assess the statistical difference in survival between the two groups, a log-rank test was performed. The hazard ratio (HR) and p-value were computed using the "survdiff" function from the "survival" package in R.
| Tumor | HR | P_value |
|---|---|---|
| TCGA-DLBC | 7.12 | 2.00e-03 |
| TCGA-LGG | 2.42 | 0.01 |
| TCGA-READ | 5.07 | 0.01 |
| TCGA-KIRC | 1.59 | 0.02 |
| TCGA-THYM | 0.27 | 0.03 |
| TCGA-BRCA | 1.57 | 0.04 |
| TCGA-COAD | 0.59 | 0.06 |
| TCGA-BLCA | 1.46 | 0.08 |
| TCGA-TGCT | 0.26 | 0.09 |
| TCGA-KICH | 0.39 | 0.11 |