Charlie15b
Basic information Differential Expression Stage analysis Survival analysis Correlation analysisThe patients were classified into two groups based on the expression levels of TE families or the identification of TE-initiated transcripts. To assess the statistical difference in survival between the two groups, a log-rank test was performed. The hazard ratio (HR) and p-value were computed using the "survdiff" function from the "survival" package in R.
| Tumor | HR | P_value |
|---|---|---|
| TCGA-LUSC | 1.96 | 1.00e-03 |
| TCGA-UCS | 3.02 | 5.00e-03 |
| TCGA-CESC | 0.53 | 0.01 |
| TCGA-OV | 0.77 | 0.04 |
| TCGA-BRCA | 1.55 | 0.06 |
| TCGA-SKCM | 2.83 | 0.07 |
| TCGA-PRAD | 5.15 | 0.07 |
| TCGA-STAD | 1.41 | 0.07 |
| TCGA-COAD | 1.54 | 0.10 |
| TCGA-UCEC | 1.71 | 0.12 |