TE_9233
Basic information Differential Expression Stage analysis Survival analysis Correlation analysis| TE family | AluY |
|---|---|
| TE superfamily | Alu |
| TE class | SINE |
| Gene | - |
| Class | Intergenic |
| Coding | Other |
| Tumor-specific score | 0.07 |
| Counts of samples | TCGA_tumor:24; TCGA_normal:0; GTEx:380 |
| TSS | chr4(-):1320935 |
Transcript isoforms
| Transcript_ID | Gene | Class | Coding | ORF | Position |
|---|---|---|---|---|---|
| teRNA_9233.1 | - | Intergenic | Other | MAPDGGHSSPVGSTAEASQTTPSSDENVGCTLEWLRVMTWRLRKLNKTAGHPGAPAPVTAEDQCTLPSGRSTHGTAVTHHIHACEPRRHTPAVPRATVLCRSGQMRASRTRGLTRSPCPLGSCSPLPSWRAGRTPHTHTSREAVQQWGEGMGGRVPLHPGQHLREGERGAGQMPRTRASKRVGPGGSAGESGVWGLQMSPECGACR* | chr4(-):1317153,1317173,1317248,1320553,1320759,1320936 |
1
GTEx
The proportion of samples in which the TE-initiated transcript was expressed across 46 body sites in the Genotype-Tissue Expression (GTEx) project.
TCGA
The proportion of samples in which the TE-initiated transcript was expressed across 33 cancer types from The Cancer Genome Atlas (TCGA).
GTEx
The expression of TE-initiated transcript across 46 body sites from The Genotype-Tissue Expression (GTEx) project.
