TE_8194
Basic information Differential Expression Stage analysis Survival analysis Correlation analysis| TE family | MLT1L |
|---|---|
| TE superfamily | MaLR |
| TE class | LTR |
| Gene | LRRC2 |
| Class | Annoated |
| Coding | Other |
| Tumor-specific score | 0.05 |
| Counts of samples | TCGA_tumor:17; TCGA_normal:4; GTEx:370 |
| TSS | chr3(-):46607076 |
Transcript isoforms
| Transcript_ID | Gene | Class | Coding | ORF | Position |
|---|---|---|---|---|---|
| teRNA_8194.1 | LRRC2 | Annoated | Other | MGHKVVVFDISVIRALWETRVKKHKAWQKKEVERLEKSALEKIKEEWNFVAECRRKGIPQAVYCKNGFIDTSVRLLDKIERNTLTRQSSLPKDRGKRSSAFVFELSGEHWTELPDSLKEQTHLREWYISNTLIQIIPTYIQLFQAMRILDLPKNQISHLPAEIGCLKNLKELNVGFNYLKSIPPELGDCENLERLDCSGNLELMELPFELSNLKQVTFVDISANKFSSVPICVLRMSNLQWLDISSNNLTDLPQDIDRLEELQSFLLYKNKLTYLPYSMLNLKKLTLLVVSGDHLVELPTALCDSSTPLKFVSLMDNPIDNAQCEDGNEIMESERDRQHFDKEVMKAYIEDLKERESVPSYT | chr3(-):46519043,46519063,46521522,46521658,46527426,46527581,46529905,46530050,46532773,46532909,46539045,46539201,46545046,46545253,46551467,46551610,46606809,46607077 |
1
GTEx
The proportion of samples in which the TE-initiated transcript was expressed across 46 body sites in the Genotype-Tissue Expression (GTEx) project.
TCGA
The proportion of samples in which the TE-initiated transcript was expressed across 33 cancer types from The Cancer Genome Atlas (TCGA).
GTEx
The expression of TE-initiated transcript across 46 body sites from The Genotype-Tissue Expression (GTEx) project.
