TE_8
Basic information Differential Expression Stage analysis Survival analysis Correlation analysis| TE family | MER4D1 |
|---|---|
| TE superfamily | ERV1 |
| TE order | LTR |
| Gene | ENSG00000293331 |
| Class | Chimeric |
| Coding | Non-coding |
| Tumor-specific score | 3.27 |
| Counts of samples | TCGA_tumor:144; TCGA_normal:4; GTEx:45 |
| TSS | chr1(-):587313 |
Transcript isoforms
| Transcript_ID | Gene | Class | Coding | ORF | Position |
|---|---|---|---|---|---|
| teRNA_8.1 | ENSG00000293331 | Chimeric | Non-coding | Non-coding | chr1(-):586338,586358,586821,586955,587056,587314 |
| teRNA_8.2 | ENSG00000293331 | Chimeric | Non-coding | Non-coding | chr1(-):586935,586955,587056,587314 |
1
GTEx
The proportion of samples in which the TE-initiated transcript was expressed across 46 body sites in the Genotype-Tissue Expression (GTEx) project.
TCGA
The proportion of samples in which the TE-initiated transcript was expressed across 33 cancer types from The Cancer Genome Atlas (TCGA).
GTEx
The expression of TE-initiated transcript across 46 body sites from The Genotype-Tissue Expression (GTEx) project.
