TE_40
Basic information Differential Expression Stage analysis Survival analysis Correlation analysis| TE family | L1MC5a_3end |
|---|---|
| TE superfamily | L1 |
| TE class | LINE |
| Gene | TP73-AS3 |
| Class | Annoated |
| Coding | Non-coding |
| Tumor-specific score | 3.51 |
| Counts of samples | TCGA_tumor:1298; TCGA_normal:50; GTEx:366 |
| TSS | chr1(-):3668779 |
Transcript isoforms
| Transcript_ID | Gene | Class | Coding | ORF | Position |
|---|---|---|---|---|---|
| teRNA_40.1 | TP73-AS3 | Annoated | Non-coding | Non-coding | chr1(-):3659410,3659430,3662153,3662265,3668625,3668780 |
1
GTEx
The proportion of samples in which the TE-initiated transcript was expressed across 46 body sites in the Genotype-Tissue Expression (GTEx) project.
TCGA
The proportion of samples in which the TE-initiated transcript was expressed across 33 cancer types from The Cancer Genome Atlas (TCGA).
GTEx
The expression of TE-initiated transcript across 46 body sites from The Genotype-Tissue Expression (GTEx) project.
