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TE_38988

Basic information Differential Expression Stage analysis Survival analysis Correlation analysis

TE family LTR25-int
TE superfamily ERV1
TE class LTR
Gene -
Class Intergenic
Coding Non-coding
Tumor-specific score 1.21
Counts of samples TCGA_tumor:72; TCGA_normal:20; GTEx:47
TSS chrY(-):21146869


Transcript isoforms

Transcript_ID Gene Class Coding ORF Position
teRNA_38988.1 - Intergenic Non-coding Non-coding chrY(-):21134119,21134139,21146608,21146870
teRNA_38988.2 - Intergenic Non-coding Non-coding chrY(-):21099849,21099869,21146608,21146870
teRNA_38988.3 - Intergenic Non-coding Non-coding chrY(-):21134119,21134139,21136256,21136714,21146608,21146870
teRNA_38988.4 - Intergenic Non-coding Non-coding chrY(-):21136694,21136714,21146608,21146870
teRNA_38988.5 - Intergenic Non-coding Non-coding chrY(-):21089565,21089585,21120752,21120826,21146608,21146870
teRNA_38988.6 - Intergenic Non-coding Non-coding chrY(-):21086636,21086656,21089381,21089603,21120752,21120826,21146608,21146870
teRNA_38988.7 - Intergenic Non-coding Non-coding chrY(-):21086636,21086656,21089381,21089603,21146608,21146870
teRNA_38988.8 - Intergenic Non-coding Non-coding chrY(-):21086636,21086656,21089381,21089585,21146608,21146870
teRNA_38988.9 - Intergenic Non-coding Non-coding chrY(-):21106088,21106108,21146608,21146870
teRNA_38988.10 - Intergenic Non-coding Non-coding chrY(-):21132350,21132370,21146608,21146870

GTEx

The proportion of samples in which the TE-initiated transcript was expressed across 46 body sites in the Genotype-Tissue Expression (GTEx) project.



TCGA

The proportion of samples in which the TE-initiated transcript was expressed across 33 cancer types from The Cancer Genome Atlas (TCGA).



GTEx

The expression of TE-initiated transcript across 46 body sites from The Genotype-Tissue Expression (GTEx) project.



TCGA

The expression of TE-initiated transcript across 33 cancer types from The Cancer Genome Atlas (TCGA).