TE_38971
Basic information Differential Expression Stage analysis Survival analysis Correlation analysis| TE family | LTR9B |
|---|---|
| TE superfamily | ERV1 |
| TE class | LTR |
| Gene | - |
| Class | Intergenic |
| Coding | Non-coding |
| Tumor-specific score | 3.38 |
| Counts of samples | TCGA_tumor:2; TCGA_normal:0; GTEx:0 |
| TSS | chrY(-):18690308 |
Transcript isoforms
| Transcript_ID | Gene | Class | Coding | ORF | Position |
|---|---|---|---|---|---|
| teRNA_38971.1 | - | Intergenic | Non-coding | Non-coding | chrY(-):18683091,18683111,18684231,18684325,18690081,18690309 |
| teRNA_38971.2 | - | Intergenic | Non-coding | Non-coding | chrY(-):18682780,18682800,18682938,18683111,18684231,18684325,18690081,18690309 |
| teRNA_38971.3 | - | Intergenic | Non-coding | Non-coding | chrY(-):18683091,18683111,18684231,18684325,18690061,18690309 |
| teRNA_38971.4 | - | Intergenic | Non-coding | Non-coding | chrY(-):18681516,18681536,18682938,18683111,18684231,18684325,18690061,18690309 |
1
GTEx
The proportion of samples in which the TE-initiated transcript was expressed across 46 body sites in the Genotype-Tissue Expression (GTEx) project.
TCGA
The proportion of samples in which the TE-initiated transcript was expressed across 33 cancer types from The Cancer Genome Atlas (TCGA).
GTEx
The expression of TE-initiated transcript across 46 body sites from The Genotype-Tissue Expression (GTEx) project.
