TE_38956
Basic information Differential Expression Stage analysis Survival analysis Correlation analysis| TE family | LTR6A |
|---|---|
| TE superfamily | ERV1 |
| TE class | LTR |
| Gene | ENSG00000291034 |
| Class | Chimeric |
| Coding | Non-coding |
| Tumor-specific score | 1.34 |
| Counts of samples | TCGA_tumor:74; TCGA_normal:9; GTEx:53 |
| TSS | chrY(-):12361838 |
Transcript isoforms
| Transcript_ID | Gene | Class | Coding | ORF | Position |
|---|---|---|---|---|---|
| teRNA_38956.1 | ENSG00000291034 | Chimeric | Non-coding | Non-coding | chrY(-):12354751,12354771,12355258,12356196,12358733,12358859,12361817,12361839 |
| teRNA_38956.2 | ENSG00000291034 | Chimeric | Non-coding | Non-coding | chrY(-):12354751,12354771,12355258,12356170,12358733,12358859,12361817,12361839 |
1
GTEx
The proportion of samples in which the TE-initiated transcript was expressed across 46 body sites in the Genotype-Tissue Expression (GTEx) project.
TCGA
The proportion of samples in which the TE-initiated transcript was expressed across 33 cancer types from The Cancer Genome Atlas (TCGA).
GTEx
The expression of TE-initiated transcript across 46 body sites from The Genotype-Tissue Expression (GTEx) project.
