TE_38952
Basic information Differential Expression Stage analysis Survival analysis Correlation analysis| TE family | THE1B |
|---|---|
| TE superfamily | MaLR |
| TE class | LTR |
| Gene | -, ENSG00000291034 |
| Class | Chimeric, Intergenic |
| Coding | Non-coding |
| Tumor-specific score | 0.18 |
| Counts of samples | TCGA_tumor:73; TCGA_normal:6; GTEx:465 |
| TSS | chrY(-):12110027 |
Transcript isoforms
| Transcript_ID | Gene | Class | Coding | ORF | Position |
|---|---|---|---|---|---|
| teRNA_38952.1 | ENSG00000291034 | Chimeric | Non-coding | Non-coding | chrY(-):12089265,12089285,12089886,12089977,12098016,12098099,12109966,12110028 |
| teRNA_38952.2 | - | Intergenic | Non-coding | Non-coding | chrY(-):12051598,12051618,12055415,12055725,12109966,12110028 |
| teRNA_38952.3 | - | Intergenic | Non-coding | Non-coding | chrY(-):12089262,12089282,12098016,12098099,12108883,12108947,12109966,12110028 |
| teRNA_38952.4 | - | Intergenic | Non-coding | Non-coding | chrY(-):12089262,12089282,12098016,12098099,12106882,12107015,12109966,12110028 |
1
GTEx
The proportion of samples in which the TE-initiated transcript was expressed across 46 body sites in the Genotype-Tissue Expression (GTEx) project.
TCGA
The proportion of samples in which the TE-initiated transcript was expressed across 33 cancer types from The Cancer Genome Atlas (TCGA).
GTEx
The expression of TE-initiated transcript across 46 body sites from The Genotype-Tissue Expression (GTEx) project.
