TE_34152
Basic information Differential Expression Stage analysis Survival analysis Correlation analysis| TE family | AluSx1 |
|---|---|
| TE superfamily | Alu |
| TE order | SINE |
| Gene | ENSG00000268401, - |
| Class | Chimeric, Intergenic |
| Coding | Non-coding |
| Tumor-specific score | 0.06 |
| Counts of samples | TCGA_tumor:77; TCGA_normal:1; GTEx:1540 |
| TSS | chr19(+):46027458 |
Transcript isoforms
| Transcript_ID | Gene | Class | Coding | ORF | Position |
|---|---|---|---|---|---|
| teRNA_34152.1 | ENSG00000268401 | Chimeric | Non-coding | Non-coding | chr19(+):46027459,46027631,46027665,46028043,46028147,46028258,46030120,46030140 |
| teRNA_34152.2 | ENSG00000268401 | Chimeric | Non-coding | Non-coding | chr19(+):46027459,46027631,46027665,46028043,46028147,46028167 |
| teRNA_34152.3 | ENSG00000268401 | Chimeric | Non-coding | Non-coding | chr19(+):46027459,46027631,46027665,46028258,46030120,46030140 |
| teRNA_34152.4 | - | Intergenic | Non-coding | Non-coding | chr19(+):46027459,46027631,46027665,46027701,46027735,46027755 |
| teRNA_34152.5 | ENSG00000268401 | Chimeric | Non-coding | Non-coding | chr19(+):46027459,46027631,46027665,46027701,46027735,46028043,46028147,46028258,46030120,46030140 |
| teRNA_34152.6 | ENSG00000268401 | Chimeric | Non-coding | Non-coding | chr19(+):46027459,46027631,46027665,46027701,46027735,46028043,46028147,46028167 |
1
GTEx
The proportion of samples in which the TE-initiated transcript was expressed across 46 body sites in the Genotype-Tissue Expression (GTEx) project.
TCGA
The proportion of samples in which the TE-initiated transcript was expressed across 33 cancer types from The Cancer Genome Atlas (TCGA).
GTEx
The expression of TE-initiated transcript across 46 body sites from The Genotype-Tissue Expression (GTEx) project.
