TE_34042
Basic information Differential Expression Stage analysis Survival analysis Correlation analysis| TE family | LTR12C |
|---|---|
| TE superfamily | ERV1 |
| TE class | LTR |
| Gene | - |
| Class | Intergenic |
| Coding | Non-coding |
| Tumor-specific score | 0.04 |
| Counts of samples | TCGA_tumor:124; TCGA_normal:3; GTEx:3629 |
| TSS | chr19(+):38822073 |
Transcript isoforms
| Transcript_ID | Gene | Class | Coding | ORF | Position |
|---|---|---|---|---|---|
| teRNA_34042.1 | - | Intergenic | Non-coding | Non-coding | chr19(+):38822074,38822133,38822452,38823397,38831036,38831056 |
| teRNA_34042.2 | - | Intergenic | Non-coding | Non-coding | chr19(+):38822074,38822133,38822252,38823397,38831036,38831056 |
1
GTEx
The proportion of samples in which the TE-initiated transcript was expressed across 46 body sites in the Genotype-Tissue Expression (GTEx) project.
TCGA
The proportion of samples in which the TE-initiated transcript was expressed across 33 cancer types from The Cancer Genome Atlas (TCGA).
GTEx
The expression of TE-initiated transcript across 46 body sites from The Genotype-Tissue Expression (GTEx) project.
