TE_33577
Basic information Differential Expression Stage analysis Survival analysis Correlation analysis| TE family | MamSINE1 |
|---|---|
| TE superfamily | RTE-end |
| TE class | SINE |
| Gene | - |
| Class | Intergenic |
| Coding | Non-coding |
| Tumor-specific score | 0.06 |
| Counts of samples | TCGA_tumor:25; TCGA_normal:1; GTEx:500 |
| TSS | chr18(-):73647592 |
Transcript isoforms
| Transcript_ID | Gene | Class | Coding | ORF | Position |
|---|---|---|---|---|---|
| teRNA_33577.1 | - | Intergenic | Non-coding | Non-coding | chr18(-):73378426,73378446,73400412,73400508,73408615,73408722,73647571,73647593 |
| teRNA_33577.2 | - | Intergenic | Non-coding | Non-coding | chr18(-):73378444,73378464,73400412,73400508,73408615,73408722,73647571,73647593 |
1
GTEx
The proportion of samples in which the TE-initiated transcript was expressed across 46 body sites in the Genotype-Tissue Expression (GTEx) project.
TCGA
The proportion of samples in which the TE-initiated transcript was expressed across 33 cancer types from The Cancer Genome Atlas (TCGA).
GTEx
The expression of TE-initiated transcript across 46 body sites from The Genotype-Tissue Expression (GTEx) project.
