TE_3
Basic information Differential Expression Stage analysis Survival analysis Correlation analysis| TE family | MIRc |
|---|---|
| TE superfamily | L2-end |
| TE class | SINE |
| Gene | ENSG00000292994 |
| Class | Annoated |
| Coding | Non-coding |
| Tumor-specific score | 3.75 |
| Counts of samples | TCGA_tumor:554; TCGA_normal:54; GTEx:112 |
| TSS | chr1(-):289383 |
Transcript isoforms
| Transcript_ID | Gene | Class | Coding | ORF | Position |
|---|---|---|---|---|---|
| teRNA_3.1 | ENSG00000292994 | Annoated | Non-coding | Non-coding | chr1(-):268184,268204,268667,268816,289266,289384 |
1
GTEx
The proportion of samples in which the TE-initiated transcript was expressed across 46 body sites in the Genotype-Tissue Expression (GTEx) project.
TCGA
The proportion of samples in which the TE-initiated transcript was expressed across 33 cancer types from The Cancer Genome Atlas (TCGA).
GTEx
The expression of TE-initiated transcript across 46 body sites from The Genotype-Tissue Expression (GTEx) project.
