TE_27451
Basic information Differential Expression Stage analysis Survival analysis Correlation analysis| TE family | L4_A_Mam |
|---|---|
| TE superfamily | RTE-X |
| TE class | LINE |
| Gene | DCUN1D2 |
| Class | Chimeric |
| Coding | Non-coding, Other |
| Tumor-specific score | 0.07 |
| Counts of samples | TCGA_tumor:31; TCGA_normal:2; GTEx:533 |
| TSS | chr13(-):113485550 |
Transcript isoforms
| Transcript_ID | Gene | Class | Coding | ORF | Position |
|---|---|---|---|---|---|
| teRNA_27451.1 | DCUN1D2 | Chimeric | Other | MACTQAGERTAIYCLTQNEWRLDEATDSFFQNPDSLHRESMRNAVDKKKLERLYGRYKDPQDENKIGVDGIQQFCDDLSLDPASISVLVIAWKFRAATQCEFSRKEFLDGMTELGCDSMEKLKALLPRLEQELKDTAKFKDFYQFTFTFAKNPGQKGLGSPPFLNVKALHH* | chr13(-):113458088,113458108,113459312,113459408,113461054,113461136,113462740,113462891,113474124,113474254,113480575,113480743,113483840,113484056,113485504,113485551 |
| teRNA_27451.2 | DCUN1D2 | Chimeric | Non-coding | Non-coding | chr13(-):113458088,113458108,113459312,113459408,113461054,113461136,113474124,113474254,113480575,113480743,113483840,113484056,113485504,113485551 |
| teRNA_27451.3 | DCUN1D2 | Chimeric | Other | MACTQAGERTAIYCLTQNEWRLDEATDSFFQNPDSLHRESMRNAVDKKKLERLYGRYKDPQDENKIGVDGIQQFCDDLSLDPASISVLVIAWKFRAATQCEFSRKEFLDGMTELGCDSMEKLKALLPRLEQELKDTAKFKDFYQFTFTFAKNPGQKGLGSPPFLNVKALHH* | chr13(-):113459388,113459408,113461054,113461136,113462740,113462891,113474124,113474254,113480575,113480743,113483840,113484056,113485504,113485551 |
| teRNA_27451.4 | DCUN1D2 | Chimeric | Other | MACTQAGERTAIYCLTQNEWRLDEATDSFFQNPDSLHRESMRNAVDKKKLERLYGRYKDPQDENKIGVDGIQQFCDDLSLDPASISVLVIAWKFRAATQCEFSRKEFLDGMTELGCDSMEKLKALLPRLEQELKDTAKFKDFYQFTFTFAKNPGQKGLGSPPFLNVKALHH* | chr13(-):113458088,113458108,113459312,113459408,113461054,113461136,113462740,113462891,113474124,113474254,113480575,113480743,113483840,113484223,113485504,113485551 |
| teRNA_27451.5 | DCUN1D2 | Chimeric | Non-coding | Non-coding | chr13(-):113458088,113458108,113459312,113459408,113461054,113461136,113474124,113474254,113480575,113480743,113483840,113484223,113485504,113485551 |
| teRNA_27451.6 | DCUN1D2 | Chimeric | Other | MACTQAGERTAIYCLTQNEWRLDEATDSFFQNPDSLHRESMRNAVDKKKLERLYGRYKDPQDENKIGVDGIQQFCDDLSLDPASISVLVIAWKFRAATQCEFSRKEFLDGMTELGCDSMEKLKALLPRLEQELKDTAKFKDFYQFTFTFAKNPGQKGLGSPPFLNVKALHH* | chr13(-):113459388,113459408,113461054,113461136,113462740,113462891,113474124,113474254,113480575,113480743,113483840,113484223,113485504,113485551 |
| teRNA_27451.7 | DCUN1D2 | Chimeric | Non-coding | Non-coding | chr13(-):113474234,113474254,113480575,113480743,113483840,113484223,113485504,113485551 |
| teRNA_27451.8 | DCUN1D2 | Chimeric | Non-coding | Non-coding | chr13(-):113480723,113480743,113483840,113484223,113485504,113485551 |
| teRNA_27451.9 | DCUN1D2 | Chimeric | Non-coding | Non-coding | chr13(-):113480723,113480743,113483840,113484196,113485504,113485551 |
1
GTEx
The proportion of samples in which the TE-initiated transcript was expressed across 46 body sites in the Genotype-Tissue Expression (GTEx) project.
TCGA
The proportion of samples in which the TE-initiated transcript was expressed across 33 cancer types from The Cancer Genome Atlas (TCGA).
GTEx
The expression of TE-initiated transcript across 46 body sites from The Genotype-Tissue Expression (GTEx) project.
