TE_26931
Basic information Differential Expression Stage analysis Survival analysis Correlation analysis| TE family | AluYk3 |
|---|---|
| TE superfamily | Alu |
| TE class | SINE |
| Gene | - |
| Class | Intergenic |
| Coding | Non-coding |
| Tumor-specific score | 187.10 |
| Counts of samples | TCGA_tumor:331; TCGA_normal:0; GTEx:1 |
| TSS | chr13(+):103464535 |
Transcript isoforms
| Transcript_ID | Gene | Class | Coding | ORF | Position |
|---|---|---|---|---|---|
| teRNA_26931.11 | - | Intergenic | Non-coding | Non-coding | chr13(+):103464536,103464956,103486471,103486557,103515687,103515707 |
| teRNA_26931.12 | - | Intergenic | Non-coding | Non-coding | chr13(+):103464536,103464956,103486471,103486491 |
| teRNA_26931.13 | - | Intergenic | Non-coding | Non-coding | chr13(+):103464536,103464956,103475819,103475839 |
| teRNA_26931.14 | - | Intergenic | Non-coding | Non-coding | chr13(+):103464536,103464956,103466043,103466150,103515687,103515707 |
| teRNA_26931.15 | - | Intergenic | Non-coding | Non-coding | chr13(+):103464536,103464956,103466043,103466063 |
| teRNA_26931.16 | - | Intergenic | Non-coding | Non-coding | chr13(+):103464536,103464956,103621702,103621722 |
| teRNA_26931.17 | - | Intergenic | Non-coding | Non-coding | chr13(+):103464536,103464956,103642518,103642627,103681476,103681496 |
| teRNA_26931.18 | - | Intergenic | Non-coding | Non-coding | chr13(+):103464536,103464956,103512745,103512765 |
| teRNA_26931.19 | - | Intergenic | Non-coding | Non-coding | chr13(+):103464536,103464956,103548837,103548857 |
| teRNA_26931.20 | - | Intergenic | Non-coding | Non-coding | chr13(+):103464536,103464956,103479664,103479794,103480564,103480584 |
GTEx
The proportion of samples in which the TE-initiated transcript was expressed across 46 body sites in the Genotype-Tissue Expression (GTEx) project.
TCGA
The proportion of samples in which the TE-initiated transcript was expressed across 33 cancer types from The Cancer Genome Atlas (TCGA).
GTEx
The expression of TE-initiated transcript across 46 body sites from The Genotype-Tissue Expression (GTEx) project.
