TE_2610
Basic information Differential Expression Stage analysis Survival analysis Correlation analysis| TE family | MSTB |
|---|---|
| TE superfamily | MaLR |
| TE class | LTR |
| Gene | PTGFR |
| Class | Chimeric |
| Coding | Non-coding |
| Tumor-specific score | 0.06 |
| Counts of samples | TCGA_tumor:5; TCGA_normal:0; GTEx:106 |
| TSS | chr1(+):78514872 |
Transcript isoforms
| Transcript_ID | Gene | Class | Coding | ORF | Position |
|---|---|---|---|---|---|
| teRNA_2610.1 | PTGFR | Chimeric | Non-coding | Non-coding | chr1(+):78514873,78514998,78532213,78532353,78536406,78536426 |
1
GTEx
The proportion of samples in which the TE-initiated transcript was expressed across 46 body sites in the Genotype-Tissue Expression (GTEx) project.
TCGA
The proportion of samples in which the TE-initiated transcript was expressed across 33 cancer types from The Cancer Genome Atlas (TCGA).
GTEx
The expression of TE-initiated transcript across 46 body sites from The Genotype-Tissue Expression (GTEx) project.
