TE_2268
Basic information Differential Expression Stage analysis Survival analysis Correlation analysis| TE family | AluSx |
|---|---|
| TE superfamily | Alu |
| TE class | SINE |
| Gene | TFAP2E |
| Class | Chimeric |
| Coding | Non-coding |
| Tumor-specific score | 0.05 |
| Counts of samples | TCGA_tumor:63; TCGA_normal:1; GTEx:1522 |
| TSS | chr1(+):35583005 |
Transcript isoforms
| Transcript_ID | Gene | Class | Coding | ORF | Position |
|---|---|---|---|---|---|
| teRNA_2268.1 | TFAP2E | Chimeric | Non-coding | Non-coding | chr1(+):35583006,35583045,35588330,35588552,35589930,35590048,35590634,35590775,35594394,35594414 |
1
GTEx
The proportion of samples in which the TE-initiated transcript was expressed across 46 body sites in the Genotype-Tissue Expression (GTEx) project.
TCGA
The proportion of samples in which the TE-initiated transcript was expressed across 33 cancer types from The Cancer Genome Atlas (TCGA).
GTEx
The expression of TE-initiated transcript across 46 body sites from The Genotype-Tissue Expression (GTEx) project.
